KEGG   Viruses: 944307
Entry
944307            CDS       T40000                                 
Symbol
L, RYSVgp7
Name
(RefSeq) rice transitory yellowing virus; large protein
  KO
K26704  Rhabdoviridae RNA-directed RNA polymerase
Virus
59380  rice transitory yellowing virus
SSDB
Motif
Pfam: Mononeg_RNA_pol Mononeg_mRNAcap
Other DBs
NCBI-GeneID: 944307
NCBI-ProteinID: NP_620502
RS: NC_003746
UniProt: O10378
Position
NC_003746:7895..13798
AA seq 1967 aa
MDDEGHGYWQDYDEDESWLDAENDVFDDDIFEEAEDNEHLVEGGDFHLKSALRGEADMLT
NPIYEKEREKLQEDVGDLGVALGHLNVRPFLEKMGERISTDHTNTPLIENIKQGGFGAIH
HMKSTARLIVAEAATVTETMLTSGVDTTLAGAYHFFEQNHPHMKCTVNMVLMFLTILNNV
KNIRLNVDLHQILKNNISIKGSTVCMYITVATVAYFSTDIVVFDIDGQKYNTPKTYFLNA
CDKIQERFNVILYSYLAEGLSIPGSPPTYIVNRIIDWGDSILYQMGNDGYDVIALYEATV
VGVILSRDDKDLSPTSGGGDFLENIQQDLGPVQQNHIRYLIALLHDMTPHQLADLHGLYR
IWAHPIIDIDGGVKKLQKVTQSLKGDINSKPESQETVRSFRRLFVMDYFVKHQFYPPITL
PEKSNCYIGNCIRTSKKIDESHINYNFSDWDLVELGGAFSIPYSWNVLHLAKDKAISPTR
SEMYTMLCKTKRVFNAELRRGVLKLMNTTLTPLREFLTEVAEHGLDIDDCIIGLFPKERE
LKIMARFFALLSFKMRLYFTATEELLGSKLLRYFPQITMSSNLLDMQEKMSSMSRDLESQ
NKSVTYVINMDFVKWNQQMRESTCEGFLKNWSKLFGLPGLYSRSHQIFRDSILYIADGTR
DLTPDPDTGIMVDNNVCWIDDGAGKEGIRQKAWTIMTVCDIAAVARHHPGVFHLVGGGDN
QVLTVTYHTNQIDTDGNITEEGKSKIKAKVKKFIEALETHFAARGLPLKTSETWCSTSLF
MYNKFMYYKGVPLRSPLKQVSRLFPYSNNTSMTLQSMAQCLGTGLRSAAQKEVSHIALLF
MRNIWGSVLGWIILYCHPMLPSISSETCNSGVSTIVRGRKAINMKTHRIDLVALILKILY
LPGQLGGPGLVNIYQMTMRGFPDPVTEAICFLRKFKNYLICVGSSYSSHLARMAGVSFSA
SRSYEPLIEDVCSLNLDTPRSGTGGKREVPRKILLKSRLGGNQHLKELLGIMKGPSEGEF
YRAISSGKVLDVRVMHEITSSTLYAVTNTFTSRVDKTATLKRLTFKFSMLESLADAELKY
IRYLSVRDDKTHDIMFDGCSRIIADECRTKGWGKPVLGVTVPTPFEYLQISWTDEHICDN
NHITVRISNQDRQVTTETLGPCKPYLGAYTKEKFKMTEVAAAYGDEDVLSKSLRILKIIN
WRYQDGSTMSEIIKAPFRAVTDIDPQRMVQESTVTKGDYDHRRKMDARVHGGIPNFVTTP
LSHISISTSTWYKHARGKNENIHFQACIIQTMYQIIIRTMSNIHSQEKLHVHECCQTSIS
EIQEPRANLDLTTPQMIPTFPTLMGNPLVYIPEQSITFDYSRTQEVDYSRRVGSLDCQRS
TDYGWVDAYSSLSWLIMCDVIGWTKMPDSFYIMQQERVDHYLLSMYIISIWKVLKSEFDL
HKTMLDWGPLLKVYSSDTGVQVLSQSMGIVVLGKLEGGLSVNMMDICNSLTGLTSNQIPP
FSVNLALPRIHKQVATWWKLTCSDTMYCIQCSNILKGYWEGTLINTRIDNDLRCSECADG
GISPRIVNAHISNLSDHLIKIIPDREEVQLPLLAGGEDLNNLEVVLSLEDEWPDSDDITI
LNRIGEMNDIDGRMKNYLEVMALLNPDVVIIRPEILELEILRRVCEVVRLASEGKLIIHI
LVEEPSYLESGAIYEMERAFPRHNLFHVQFSFRKPPEGLHKLWLLPQDITLARADVGDWL
VIPFTQLLDFHDTITPDTRLHHQREAIRQDVFWSTKEQGGLGLVVLQHICTKTELSYRLD
RSKVDVEINKMMIKDPVMGGKYVILKRRCSWAIFSTKYELLCSAERIKGNLSADGKKITS
KDFSRTYKEDIIIFIISVLMRSLDCDEKRVMTLSYVECLPELLTLKPRFNKSGVISVRYL
DYFWFFKRVYSYNNPEVAIPYSAVIKGVNLGSPRKEGYSLASSDGAP
NT seq 5904 nt   +upstreamnt  +downstreamnt
atggatgatgaggggcatggttattggcaggattatgatgaggatgagagttggttggat
gctgagaatgatgtgtttgatgatgatatctttgaggaagcggaagacaatgagcatctg
gtggaagggggagactttcatttaaaatcagctctccgaggagaggctgacatgctgaca
aatcctatatatgagaaggaaagagaaaaactgcaggaagatgtgggagatctcggggtt
gctctaggtcacctgaatgtccgaccctttcttgagaaaatgggtgagcgcatctcaacc
gatcacacaaacactcccttaattgaaaacataaaacagggaggatttggggcaattcac
catatgaagagtactgccaggctcattgtggcagaggcagcaactgtcacagagacaatg
ctgactagtggagttgataccactctcgcaggtgcatatcacttctttgagcaaaaccat
cctcatatgaaatgtactgttaatatggtgctaatgttcctgaccattctgaataatgta
aagaatatcagattgaatgtagatctccatcagatattgaaaaataacatatctattaaa
ggaagcactgtatgcatgtatattactgttgctactgtagcatacttttctactgatata
gttgtatttgacattgatggccagaaatacaatacaccgaagacgtatttcttgaatgct
tgtgataagatacaagagaggtttaatgtcatactctactcatatcttgctgaaggttta
tctatacccgggtcccctccaacatatatagtcaatcgaatcatagattggggtgattca
atattgtaccaaatgggcaatgatgggtatgatgtcattgcgttgtatgaggcaactgtt
gttggggtgatattgtccagagatgacaaagacctgtctcctacatctggggggggagac
ttccttgaaaacatccagcaggatcttgggcctgtccaacagaaccatatacgttatttg
atagcattgttacatgatatgacccctcaccagcttgcagacctacatgggctttatcgc
atctgggcgcatccaatcatagacatagacggtggagttaagaaactgcagaaggttaca
cagagccttaaaggtgatattaattcgaagcctgagagtcaagaaactgtgcgctccttc
aggagattgtttgtgatggactattttgtaaagcaccagttctatcctcctattacactg
cctgagaagagtaactgctatataggcaactgcataagaacaagtaagaagatagacgag
agccacatcaattataatttcagtgactgggatctagtagagctgggtggagccttctcc
attccatactcatggaatgttctacatctagctaaagacaaagcaatatcaccgacaaga
tcagagatgtatacaatgctatgcaagacaaaacgggtatttaatgctgaattacggcgt
ggagtccttaaattgatgaatacaaccctaactcctctaagggaattcctaactgaagtc
gcagagcatgggctggatatagatgattgcataataggattatttcccaaggagagagaa
ttaaagattatggcaagattttttgctctgttgtctttcaaaatgaggctatattttact
gctactgaagagcttctaggcagcaagctattgagatacttccctcagattacaatgagc
tctaatttgctcgacatgcaagaaaagatgtcaagcatgtccagagatctagagtcgcag
aataaatcagtgacatatgtcataaatatggattttgtcaagtggaaccagcagatgaga
gagtccacatgtgaagggtttttaaagaattggagcaaattgttcggacttccagggcta
tattctagatctcatcagattttccgagacagcatactatacatagctgatggaaccagg
gatctaacaccggatcctgacacaggaatcatggtagacaacaatgtctgctggatagat
gacggggcgggaaaagaaggtataaggcaaaaagcctggactataatgactgtatgtgac
atagcagcagtggccaggcatcacccaggggtgtttcatcttgttgggggaggagacaat
caagtgctcacagtgacctatcataccaatcaaatagacacagatggaaatataactgag
gagggaaaaagcaagatcaaagccaaagtgaagaaatttattgaagctctggagacacat
ttcgctgctcgggggctgccattgaagacatccgagacatggtgcagtacttcattattt
atgtacaacaagtttatgtactataagggtgtaccattgagatcacccttaaaacaggta
tctagattgttcccttattctaacaatacatccatgacacttcaatctatggctcaatgt
ttgggcaccggactacgatcagccgcccagaaggaagtgagtcatattgccctactgttc
atgagaaacatatgggggtctgtcctggggtggattatactgtattgccaccctatgttg
cccagcatctctagtgaaacctgcaatagtggagtgagcactatagttagaggacgaaaa
gccatcaacatgaagactcatcggattgacttggttgctcttatattgaagatattatat
ttgccaggacaacttggtgggccaggacttgttaatatatatcagatgactatgagagga
tttccagacccagtgactgaagctatttgctttttgaggaagttcaagaactatctgatc
tgtgtaggatccagttacagttctcatctagctagaatggcgggtgtatccttctcagcc
agtcgaagctacgagccattgatagaagatgtttgcagcctcaatctggatacccccaga
tcaggaacgggggggaagagagaagttccaagaaagatattactaaaatcaagactaggg
ggcaatcagcatttaaaagagcttctcgggatcatgaagggtccaagtgaaggtgagttt
tacagagcaatatcttcagggaaggtacttgatgtgagggtgatgcatgaaataacaagc
agcaccttgtatgctgtaacgaataccttcacgtcccgtgtggacaagacagcaacccta
aagaggctcaccttcaaattctctatgctagagtctcttgcagatgcagaattgaagtat
atcagatatttgtctgtcagagatgacaagacacacgatattatgtttgatggctgcagc
agaataatcgctgatgagtgcaggacaaagggctgggggaagcctgtgctgggtgtcaca
gtacctactccttttgagtacttacaaatatcttggactgacgaacatatctgtgacaac
aatcacataacggtgaggatatctaatcaagacagacaggtgacaacagaaaccctgggt
ccatgcaagccttatctaggtgcttatacaaaagagaaattcaaaatgacagaggttgca
gcagcatacggtgatgaggatgtcctgtcaaaatccttaagaatcctgaagataattaac
tggaggtaccaagacggctcaactatgagtgagatcattaaagcacctttccgagctgtg
acggacattgatcctcaaagaatggtgcaagagagtacagtaacaaagggagactatgat
cacagaagaaagatggatgctagagttcatggaggaataccaaactttgtcactacacca
ttatcacatattagtatatctaccagtacatggtacaagcacgccaggggaaagaatgag
aatatacatttccaagcatgcatcatccagacaatgtatcagataatcataaggaccatg
agcaacatacacagtcaagagaagttacacgtacatgagtgctgccagacctcgatatcg
gagatacaagagccaagagcaaatcttgatctaacaacaccccagatgattccgaccttc
cccaccttgatgggaaatcctctggtatacatacctgagcagtccatcacatttgattac
tcacgaactcaagaggttgattactcaaggagagtgggatcactagattgccaaaggtca
acagattatggatgggtagatgcttacagctcattatcctggctgataatgtgtgatgtg
attggttggaccaaaatgcctgattctttttacatcatgcaacaggagagagtggatcac
tacttattatcaatgtatattatttccatatggaaggtgctgaagagtgaatttgacctg
cacaaaaccatgttggattgggggcctttattgaaagtgtactcatcagacacaggagtg
caagttttgagtcaatcaatggggatagttgtgttgggaaaattggaagggggcctgtcg
gtgaacatgatggatatatgcaattccctgacaggactgactagcaatcagatacctcca
ttctctgtaaacctggcactgcctagaatacacaagcaggtagctacatggtggaaatta
acatgcagtgatactatgtactgtatacagtgttccaacattctaaagggttactgggag
gggacattaataaatacaagaatagacaatgacttaagatgttcagaatgtgcagacggc
ggcatttcgcctcgaatagttaatgctcacataagcaatttgtcagatcatctgattaaa
ataatacctgatcgagaggaggtccagctgccattgcttgccggaggtgaggacctaaat
aaccttgaggtggtcctatcactcgaagatgagtggccagacagtgacgatatcactatc
ctgaacaggataggagagatgaacgacattgatgggaggatgaaaaactacctagaagtc
atggcactattgaatcctgatgttgtgataatcagacctgaaatactggagttggaaatc
ttgcggagagtatgtgaggtggtaagactagcatccgaagggaagctcatcatccacata
cttgttgaggagccctcatatctggaaagtggtgccatatatgagatggagcgtgcattt
ccgaggcataatcttttccatgtgcaattcagcttcagaaagccaccagaggggctgcac
aaactctggttgctgccacaggatataactctggccagggctgatgtgggcgactggctt
gtgatccccttcactcagctgctggatttccatgatactatcacaccagacacccgttta
caccaccaaagagaagcgattaggcaagatgttttttggtcaacaaaggagcaggggggt
ttaggcctggtggtcttgcagcatatttgtaccaaaacagagttgagttatcgtttggac
agatccaaagttgatgtggagatcaacaagatgatgatcaaggaccctgtaatgggtggg
aaatatgttatcctaaagaggagatgctcatgggctatattttccaccaagtatgagttg
ctatgttctgcagagagaataaagggcaacctcagtgccgatgggaagaagatcacatca
aaggacttctcaagaacatacaaagaagatatcataatatttattatctcagtcttgatg
agatcactggactgtgacgagaagagggtcatgacattaagttatgtggagtgcttgcct
gagctgctaacattgaaaccaaggttcaataaatcaggagtaatcagtgtcagatatcta
gattacttctggttttttaaacgggtgtactcatataacaaccctgaggttgcaatacct
tactcagcagtaataaagggggtcaaccttggctctcctagaaaggaggggtacagtctg
gcatcatccgacggcgcaccgtga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
Taxonomy (1)   
   TAX (1)   
All databases (51)   

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