KEGG   Viruses: 944391
Entry
944391            CDS       T40000                                 
Symbol
TCVgp1
Name
(RefSeq) Turnip crinkle virus; p88 replicase
Virus
11988  Turnip crinkle virus
SSDB
Motif
Pfam: RdRP_3 RdRP_2
Other DBs
NCBI-GeneID: 944391
NCBI-ProteinID: NP_620720
RS: NC_003821
UniProt: P17460
Position
NC_003821:64..2391
AA seq 775 aa
MPLLHTLNTALAVGLLGARYYPEVQTFLGLPDYVGHMKNVVRSVFQGSGLVVVSSDTVGV
RGTYSNRGQIGSSLGCILAVPDSGADIEIDLDRLVGTEEEATSCLVEAVGSTADVPRRRV
RQKGRFAMHAVNAAKLHFCGVPKPTEANRLAVSKWLVQYCKERHVVDSHIRTIVNTALPR
VFTPDAEDIQVVLDLHSVRAHDHRNALAEAGKVRKWWVNLAMHPMTGRSWSRAWRRLCRL
PDDQAISFVRXGCLRELVGRETQISRGENPAMRVFPLANPPKVRRIFHICGMGNGLDFGV
HNNSLNNLRRGLMERVFYVEDAQKQLKPAPQPIPGIFGKLSGIRRRLVRLAGNHTPVPRE
KYPSFYKGRRATIYQKALDSLHDRPVSRKDAELKTFVKAEKINFTAKKDPAPRVIQPRDP
RYNIEVGKYLKPYEHHLYRAIDAMWGGPTVLKGYDVGELGNIMSNTWDKFRKTCAIGFDM
KRFDQHVSVDALRWEHSVYNAGFNCPELAQLLTWQLTNKGVGRASDGFIKYQVDGCRMSG
DVNTALGNCLLACSITKYLMKGIKCKLINNGDDCVLFFEADEVDRVRERLHHWIDFGFQC
IAEEPQYELEKVEFCQMSPIFDGEGWVMVRNPRVSLSKDSYSTTQWANEKDAARWLAAIG
ECGLAIAGGVPVLQSYYSCLKRNFGPLAGDYKKKMQDVSFDSGFYRLSKNGMRGSKDVSQ
DARFSFYRGFGYTPDEQEALEEYYDNLELLCEWDPTGYKEELSDRWILNEFPTTL
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgcctcttctacacacactcaacacagcgctcgcagtgggactcctaggagccaggtac
taccctgaggttcaaaccttcttggggctgcctgactacgtgggtcacatgaagaatgta
gtacggtctgttttccagggatctgggctagtagtagtgtcctccgacacagtcggtgtc
agggggacgtatagtaatagaggtcagataggtagtagtctcgggtgtatactagccgtt
ccggatagcggggcggatatagaaatagacttagataggttggtaggaacggaagaggaa
gccacatcctgtttggtggaggcggtaggtagtaccgcagatgtccccaggaggagagtt
cgtcaaaaggggcggtttgccatgcatgccgtcaacgcagcaaagctgcacttttgtggc
gtcccaaaacccactgaagcgaatcgactagcggtctcaaaatggcttgtccaatactgc
aaagagagacatgtcgtagacagccacatcagaacgatagtcaatacggctcttcctaga
gtgttcacgcctgacgcggaagacattcaggtcgtgctggatttgcacagtgtaagagca
cacgaccaccgcaacgccctagccgaagcaggcaaagtgcggaagtggtgggtcaatctc
gcgatgcatcccatgactgggaggtcgtggtccagggcttggaggcgattatgccgactg
cctgacgaccaggcgatctcttttgtccgctaggggtgcttgcgggagctggtcgggagg
gagactcaaatctccaggggtgaaaacccggccatgcgcgtgttcccgttagcaaatccc
ccgaaggttcgacgcatcttccatatctgtggaatgggcaatggtttagactttggagtc
cacaacaactcactcaacaatttgagaagagggttgatggaaagagtcttttacgttgaa
gatgcgcagaagcaattgaaaccagccccccaaccgatcccagggattttcgggaagttg
agtgggattcggagacgattggtcaggttggccggaaatcatacccctgtgcctcgggag
aaatacccgtcgttctacaagggcaggagggccaccatataccaaaaggctttggattct
ctacatgacagaccggtatcccggaaggacgcagaactcaaaacattcgtgaaggcagaa
aagatcaatttcacggctaagaaagacccggctccacgggtcatccagccgagggaccca
cgatataatattgaggttgggaaatacttgaaaccgtacgagcaccatttatatcgggca
attgacgctatgtggggtgggcccactgtgctgaaaggatacgatgtgggggagcttgga
aacattatgagtaacacctgggataaattccggaaaacgtgtgcgataggatttgacatg
aagagattcgaccagcacgtatccgtggacgccctacgatgggaacacagtgtatacaac
gcgggctttaactgtcccgagttggcacagctgctaacttggcagttgaccaacaagggg
gttgggagagcctccgatggctttatcaaataccaagttgatggttgtcgcatgtccgga
gatgttaacacagccttgggcaactgcctactggcttgctctatcaccaagtacttaatg
aagggaatcaaatgcaaattaatcaacaatggagacgattgtgtgctgttcttcgaagct
gatgaagtcgacagggtgcgcgaaaggctgcatcattggatcgactttgggtttcaatgc
atagcggaagaaccacaatacgaattggagaaagttgaattttgccagatgtcccctatt
ttcgatggtgaagggtgggtcatggtcagaaacccccgtgtgagcctctccaaggacagc
tacagcaccacacaatgggcgaatgagaaagatgcagccagatggttggctgccatcgga
gagtgtggcttggctattgcaggtggcgtaccagtgttacaatcatattattcttgcctg
aagaggaattttggacccctggccggggactacaagaagaagatgcaagatgtttccttt
gatagtggattctacaggttatccaagaacgggatgaggggcagcaaagacgtgtcccaa
gatgctaggttcagcttttaccgggggttcggctacactccagacgagcaggaagcgctt
gaggagtactacgacaacctcgaactgctctgtgagtgggaccccacgggatataaagaa
gaacttagtgatagatggatcctgaacgaattccctacaactctctaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
Taxonomy (1)   
   TAX (1)   
All databases (24)   

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