KEGG   Viruses: 944530
Entry
944530            CDS       T40000                                 
Symbol
Weevgp1
Name
(RefSeq) Western equine encephalitis virus; nonstructural polyprotein
  KO
K25300  Alphavirus polyprotein P1234
Virus
11039  Western equine encephalitis virus
SSDB
Motif
Pfam: RdRP_2 nsP3_ZBD Peptidase_C9 ToMV_Hel_N Vmethyltransf Viral_helicase1 Macro RdRP_1 AAA_30 RdRP_4 AAA_11 Chropara_Vmeth AAA_19 Nsp2_AV
Other DBs
NCBI-GeneID: 944530
NCBI-ProteinID: NP_640330
RS: NC_003908
UniProt: P13896
Position
NC_003908:25..7428
AA seq 2467 aa
MERIHVDLDADSPYVKSLQRTFPQFEIEARQVTDNDHANARAFSHVATKLIESEVDRDQV
ILDIGSAPVRHAHSNHRYHCICPMISAEDPDRLQRYAERLKKSDITDKNIASKAADLLEV
MSTPDAETPSLCMHTDATCRYFGSVAVYQDVYAVHAPTSIYHQALKGVRTIYWIGFDTTP
FMYKNMAGSYPTYNTNWADERVLEARNIGLGNSDLQESRLGKLSILRKKRLQPTNKIIFS
VGSTIYTEDRSLLRSWHLPNVFHLKGKSNFTGRCGTIVSCEGYVIKKITISPGLYGKVEN
LASTMHREGFLSCKVTDTLRGERVSFAVCTYVPATLCDQMTGILATDVSVDDAQKLLVGL
NQRIVVNGRTQRNTNTMQNYLLPVVAQAFSRWAREHRADLDDEKELGVRERTLTMGCCWA
FKTQKITSIYKKPGTQTIKKVPAVFDSFVIPRLTSHGLDMGFRRRLKLLLEPTVKPAPAI
TMADVEHLRGLQQEAEEVAAAEEIREALPPLLPEIEKETVEAEVDLIMQEAGAGSVETPR
GHIRVTSYPGEEKIGSYAILSPQAVLNSEKLACIHPLAEQVLVMTHKGRAGRYKVEPYHG
KVIVPEGTAVPVQDFQALSESATIVFNEREFVNRYLHHIAINGGALNTDEEYYKTVKTQD
TDSEYVFDIDARKCVKREDAGPLCLTGDLVDPPFHEFAYESLKTRPAAPHKVPTIGVYGV
PGSGKSGIIKSAVTKKDLVVSAKKENCAEIIRDVRRMRRMDVAARTVDSVLLNGVKHPVN
TLYIDEAFACHAGTLLALIAIVKPKKVVLCGDPKQCGFFNMMCLKVHFNHDICTEVYHKS
ISRRCTQTVTAIVSTLFYDKRMKTVNPCADKIIIDTTGTTKPHKDDLILTCFRGWVKQLQ
IDYKNHEIMTAAASQGLTRKGVYAVRYKVNENPLYSQTSEHVNVLLTRTEKRIVWKTLAG
DPWIKTLTAKYPGDFTASLDDWQREHDAIMARVLDKPQTADVFQNKVNVCWAKALEPVLA
TANIVLTRQQWETLHPFKHDRAYSPEMALNFFCTRFFGVDLDSGLFSAPTVALTYRDQHW
DNSPGKNMYGLNREVAKELSRRYPCITKAVDTGRVADIRNNTIKDYSPTINVVPLNRRLP
HSLIVDHKGQGTTDHSGFLSKMKGKSVLVIGDPISIPGKKVESMGPLPTNTIRCDLDLGI
PSHVGKYDIIFVNVRTPYRNHHYQQCEDHAIHHSMLTCKAVHHLNTGGTCVAIGYGLADR
ATENIITAVARSFRFTRVCQPKNTAENTEVLFVFFGKDNGNHTHDQDRLGVVLDNIYQGS
TRYEAGRAPAYRVIRGDISKSADQAIVNAANSKGQPGSGVCGALYRKWPAAFDRQPIAVG
TARLVKHEPLIIHAVGPNFSKMPEPEGDLKLAAAYMSIASIVNAERITKISVPLLSTGIY
SGGKDRVMQSLHHLFTAFDTTDADVTIYCLDKQWETRIIEAIHRKESVEILDDDKPVDID
LVRVHPNSSLAGRPGYSVNEGKLYSYLEGTRFHQTAKDIAEIHAMWPNKSEANEQICLYI
LGESMSSIRSKCPVEESEASAPPHTLPCLCNYAMTAERVYRLRSAKKEQFAVCSSFLLPK
YRITGVQKLQCSKPVLFSGVVPPAVHPRKYAEIILETPPPPATTTVICEPTVPERIPSPV
ISRAPSAESLLSLGGVSFSSSATRSSTAWSDYDRRFVVTADVHQANTSTWSIPSAPGLDV
QLPSDVTDSHWSIPSASGFEVRTPSVQDLTAECAKPRGLAEIMQDFNTAPFQFLSDYRPV
PAPRRRPIPSPRSTASAPPVPKPRRTKYQQPPGVARAISEAELDEYIRQHSNXRYEAGAY
IFSSETGQGHLQQKSVRQCKLQEPILDRAVHEKYYAPRLDLEREKMLQKKLQLCASEGNR
SRYQSRKVENMKAITAERLISGLGTYLSSEVNPVECYRVNYPVPIYSSTVINRFTSAEVA
VKTCNLVIQENYPTVASYCITDEYDAYLDMVDGASCCLDTATFCPAKLRSYPKKHSYLQP
EIRSAVPSPIQNTLQNVLAAATKRNCNVTQMRELPVLDSAAFNVDCFKKYACNDEYWDTF
RDNPIRLTTENVTQYVTKLKGPKAAALFANTHNLKPLQEIPMDQFVMDLKRDVKVTPGTK
HTEERPKVQVIQAADPLATAYLCGIHRELVRRLNAVLLPNIHTLFDMSAEDFDAIIAEHF
HHGDPVLETDIASFDKSEDDAIAISALMILEDLGVDQPLLDLIEAAFGNITSVHLPTGTR
FKFGAMMKSGMFLTLFVNTLVNIMIASRVLRERLTTSACAASIGDDNIVHGVVSDTLMAE
RCATWLNMEVKIIDAVIGIKAPYFCGGFILVDQITGTACRVADPLKRLFKLGKPLPVDDT
QDCDRRRALHDEAMRWNRIGITDELVKAVESRYEIILAGLIITSLSTLAESVKNFKSIRG
SPITLYG
NT seq 7404 nt   +upstreamnt  +downstreamnt
atggaaagaattcacgttgacttagatgctgacagcccgtatgtcaagtcgttacagcgg
acgtttccacaatttgagatcgaagcaaggcaggtcactgacaatgaccatgccaatgcc
agagcgttttcgcatgtggcaacaaagctcattgagagcgaagtcgaccgggaccaagtt
atcttggacattggaagtgcgcccgtcagacatgcacattccaatcaccgctatcattgt
atctgccctatgataagcgctgaagacccggacagactacaacggtatgcagaaagactt
aagaaaagtgacattaccgacaagaacatagcctctaaggcggcagacctgctggaagtc
atgtcaacaccagacgcagagactccatctctgtgtatgcacacagacgccacgtgtagg
tactttggaagtgtagcagtataccaagatgtgtacgcagtccatgcaccgacatcaatc
taccaccaggcgcttaaaggagttaggacaatttactggataggctttgacacgacccct
tttatgtacaaaaacatggcaggttcctaccctacttacaacacgaactgggctgacgag
agagtattggaagcacgtaacattggcctcggtaactcagatcttcaggagagcaggctt
ggaaaactctcaatccttaggaagaagaggctccaacctactaataagatcatattctcg
gttggttcaacaatctacacagaagatagatcactgttacgtagctggcatcttccaaac
gtgttccacttgaaaggaaagtctaacttcacaggtagatgtgggaccattgtcagctgt
gaagggtacgtcatcaaaaagataacgatcagcccaggactatacggtaaagttgagaac
ttggcgtccacaatgcatcgcgagggtttcttgagttgcaaagtcacagatacgctgcgc
ggcgagagggtttcttttgctgtgtgtacgtatgtaccagccacactttgcgatcagatg
acagggattctggcaactgacgttagtgtggatgacgcacaaaaactattggttgggctc
aaccaaaggattgtcgtcaatggtaggacgcaaagaaatactaacacaatgcagaactat
ctattaccagtggtcgcccaggcgttttccaggtgggcgcgtgaacatcgtgccgacttg
gacgacgagaaagaactaggggtgcgggagcgcactcttactatgggctgctgctgggct
ttcaagacccagaaaatcacatccatctacaagaagcctggtacgcaaacaattaagaaa
gtacctgccgtctttgactcatttgtgattccacgccttaccagccacgggctcgatatg
ggcttccgccgtaggctcaagctgctgcttgaaccaactgtcaaacccgcaccggctatt
acaatggccgatgtggagcatctgcgtggcttacagcaagaagctgaagaagtggctgca
gcggaagagatcagagaagccctgccacccttgctccctgaaatagaaaaagagaccgta
gaggcagaagtagacctcattatgcaagaggcaggagcaggtagcgtggagacaccacga
ggacacatcagggtgacaagttacccaggcgaagagaagattgggtcttacgctatactt
tcaccccaggcggtattgaatagtgaaaaactggcgtgtatccacccattggcggaacaa
gtactggtaatgactcacaaaggtagggcagggagatacaaagtcgagccataccacggt
aaggtcattgtaccagaagggacggcggtccctgttcaagacttccaggcattgagtgag
agcgctacgatcgttttcaacgagagggagttcgtaaacagatacctgcaccacatcgca
atcaacggaggagcgctaaacactgacgaagagtactataagactgtaaagactcaggac
acagactcagaatacgtcttcgatattgacgcacgaaagtgtgttaagcgagaagacgca
ggtcccttgtgcctaaccggtgatctggtagatccaccatttcacgagtttgcgtacgag
agtctcaagacacgaccagcagcacctcacaaagtcccaaccatcggagtctatggagtg
ccaggttcaggtaaatctggaatcatcaaaagcgctgtgactaagaaagatctggttgtg
agtgcgaagaaggaaaactgcgcagaaatcatcagggatgtaaggaggatgagacgtatg
gatgttgctgctaggactgtcgattcagtgcttctaaatggggttaagcaccccgttaac
actctgtacattgatgaggcatttgcctgccatgcagggacgctgctggcactgattgcc
atcgtcaaacctaagaaagtggtattgtgcggggacccaaaacaatgcggcttctttaac
atgatgtgcctgaaagtacattttaaccatgacatatgcactgaagtgtaccataaaagc
atctctaggaggtgcacacagactgtaaccgccatcgtctccacgctcttctacgacaag
cgaatgaagacggttaacccatgtgctgataaaatcatcatagataccacagggaccaca
aagccgcacaaagatgatctgattctaacctgtttcagaggatgggtgaaacagctacag
attgactacaaaaatcacgaaatcatgactgcggctgcatcgcaaggacttacgcggaaa
ggcgtttatgctgtcaggtacaaagtcaacgagaatccactctactcgcagacttctgag
cacgtgaacgtgttacttacacgcacagaaaaacgcattgtctggaagacgctagctggt
gatccctggataaagacacttacagctaaatatcccggggatttcacggcttcattggac
gactggcagcgcgaacacgacgccattatggcacgcgttcttgataagccgcagacagct
gatgtgttccagaataaggtgaacgtctgctgggcgaaggctttagagccagtcttggcc
acggccaacattgtgctgacgagacagcagtgggagacgttgcacccattcaagcatgac
agagcgtactcacctgaaatggcactgaacttcttttgcaccaggttctttggagtagac
ctggacagtgggttattttccgctcctaccgtcgcacttacttacagggatcagcactgg
gataactcgccagggaagaacatgtatgggcttaatagagaggtagcaaaggagttgtca
cggcgatatccgtgcatcacaaaagcggttgacacaggcagggtagctgatataaggaat
aataccatcaaggactactctccaacaattaatgtggttccattaaatcgccggttgccc
cactcgttgatcgttgaccacaaaggacagggtacaactgatcacagcggattcctatct
aagatgaagggcaaatctgtgttggtgatcggcgatcctatcagcattccagggaagaaa
gtagagtccatgggtccattgcccactaataccatcaggtgtgatctcgatttgggaata
cctagccatgtcggtaaatatgacattatctttgtcaatgttaggaccccgtacaggaac
catcactaccaacagtgcgaggatcacgctatccaccacagcatgctaacgtgtaaggct
gtccaccacctgaacactggcggaacatgtgtggctatagggtatgggcttgctgatcgc
gcaaccgagaatatcatcactgcggtggcacgctcatttaggtttacccgtgtctgtcag
cctaagaacactgccgaaaatactgaggttctcttcgtgttcttcggcaaggacaacggc
aaccacacacatgaccaggacagactcggtgtagtgcttgacaacatctatcaagggtca
accaggtacgaggcagggagagctccagcgtacagagtgatcagaggtgacattagcaag
agcgctgaccaagctatcgttaatgctgctaatagcaaaggtcaaccaggttccggagtg
tgcggtgcactgtaccgaaaatggccggctgcttttgatagacagccaatagctgtcggg
acggctagacttgtgaagcacgaaccgctcatcatacatgctgtaggacccaatttttct
aagatgccggaaccggagggcgaccttaagctcgcagctgcctacatgagcatagcgtcc
atcgtcaacgctgagcggattacaaaaatatcagtaccgctactgtcaaccggcatctat
tctggtggcaaagatcgagtgatgcaatcattgcatcacctgttcactgctttcgacact
acggatgccgatgtcaccatatattgcttggataaacaatgggagaccaggataatcgag
gccattcaccgcaaagaaagcgtcgaaattctggatgatgacaagccagtagacattgac
ttggtcagggtccacccaaacagctctttggcaggcagaccaggttactccgtcaatgag
ggcaagttgtattcatacctggaaggtacacgattccatcagaccgccaaggacattgcc
gaaatccatgcaatgtggcccaacaaatctgaggctaatgagcagatttgcttgtacatc
ctgggggagagtatgtccagcatccgctccaaatgcccagtagaggagtcagaggcgtct
gctccacctcacacacttccatgcctgtgtaattacgctatgacggctgagcgcgtatac
aggttgcgctctgcgaagaaagaacagttcgccgtatgctcatcattcctgttgccgaag
tacaggatcacaggcgtgcagaagctacagtgcagcaaaccagtcctgttttcaggcgtc
gtaccaccggctgtacaccccaggaagtacgcggaaataattctagaaacgccaccaccg
ccagcaacgacaaccgtaatatgtgaaccaactgtgccagaacgtatacccagtccggtg
atttctagagcaccaagtgcggaatcactgctatcgcttggcggcgtctcgttctctagc
tctgccacacgctcgtcaaccgcctggagcgactatgacaggcggtttgtggttacagct
gatgtgcatcaagcgaacacgtctacgtggagcatccctagtgctcctggcttggacgtc
cagctgccttctgacgtcactgattcccactggagtattccaagtgcatcaggctttgaa
gtgagaacaccatctgtacaggacctaactgcggagtgtgcgaagcctcgtggactggcc
gaaataatgcaagacttcaatactgctcctttccagtttctttcggactacagaccagta
ccggcaccacggagacgccccatcccatcacctagatcgacggcttccgcacctccagtt
ccaaagccacgcaggactaagtaccaacaaccaccaggagtcgctagagcgatctcagaa
gcggagttggacgagtacatccgtcaacactccaactgacggtatgaagcgggagcgtat
attttctcatcggaaacaggccaaggtcaccttcaacagaaatcagtacgtcaatgtaaa
ctacaagaacctatattggatcgggccgtccatgagaagtattacgccccgcgcctcgat
ctcgaaagagagaaaatgttacagaagaaactgcaattatgcgcctctgaaggaaataga
agcaggtatcaatcacgaaaagtagaaaatatgaaagcaattacagcggagcgactcatt
tctggattgggcacatatctatcatcagaagtgaatcctgtcgagtgttacagagtcaat
tatcctgtaccaatctactcgtcaacggtaattaacaggtttacatctgcagaggtcgcg
gttaaaacgtgcaacttagttatccaagagaattaccctacagtagccagttattgtata
acagatgaatacgatgcgtatcttgacatggtggacggcgcatcgtgctgtctagataca
gccactttttgtccggctaaactgagaagctacccaaagaagcatagctatttgcagcca
gagataagatcagccgtcccatcgcctatacagaatacattacaaaatgtattggctgca
gctactaaaaggaattgcaacgttacccaaatgcgagaattacctgtcttagattcggcg
gcatttaatgttgattgtttcaagaaatacgcatgcaatgatgagtactgggataccttt
cgcgataaccctattcggctaactacagagaacgttacgcaatatgtgacaaagctgaaa
gggccgaaagcagcagcattgtttgcgaatactcataatctaaaaccgttgcaggagata
ccaatggatcaattcgtcatggatctaaagagagatgtcaaagttactcccggcacgaaa
catacagaggagcggcctaaggtgcaggttattcaggctgcagatccccttgctaccgct
tacctttgcgggatccatcgggaattagtccgtagactgaatgcggtgcttctgccaaat
atccatactctcttcgacatgtcagcggaagattttgatgcgattattgctgaacatttc
caccacggcgacccagtattggaaacggacatcgcgtcgtttgataaaagcgaagacgac
gctatcgccatttcggcgttgatgatccttgaggacttaggtgtcgaccaaccgctctta
gatttgatagaggcggcgttcggcaatatcacatctgtgcacctacctacaggaacgagg
tttaaatttggtgccatgatgaaatccggtatgttcttaacgctgtttgtcaacacacta
gtcaatatcatgattgctagcagagtactacgtgaacggttaaccacgtcagcgtgcgcg
gcctctatcggcgacgataacatagtgcatggtgtcgtctccgacaccttgatggcggag
agatgcgccacttggctgaacatggaagtaaaaattattgatgcagttattggtatcaaa
gcaccctacttctgtgggggatttatcctggtggaccagataacaggcacagcctgcaga
gtcgcagaccctctaaaaaggctttttaagcttggaaaaccattgccagtcgatgatacc
caagactgcgaccgccgccgggcactgcatgatgaagcaatgcgatggaacagaattgga
attacggacgagttagtgaaggccgtagaatccagatacgagatcatactggcaggcctg
atcatcacgtctctgtccacgttagccgaaagcgttaagaacttcaagagcataagaggg
agcccaatcaccctctacggctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (14)   
   Pfam (14)   
Taxonomy (1)   
   TAX (1)   
All databases (75)   

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