KEGG   Viruses: 956591
Entry
956591            CDS       T40000                                 

Gene name
LCMVsSgp1
Definition
(RefSeq) Lymphocytic choriomeningitis mammarenavirus; envelope glycoprotein
  KO
K24320  Old World arenavirus glycoprotein
Taxonomy
TAX:11623 [GN:T40091]
  Lineage
Viruses; -ssRNA viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus
Organism
vg  Viruses (Lymphocytic choriomeningitis mammarenavirus)
SSDB
Motif
Pfam: Arena_glycoprot
Other DBs
NCBI-GeneID: 956591
NCBI-ProteinID: NP_694851
RS: NC_004294
UniProt: P09991
Structure
PDB: 
3MKO 5INE

Position
NC_004294:78..1574
AA seq 498 aa
MGQIVTMFEALPHIIDEVINIVIIVLIVITGIKAVYNFATCGIFALISFLLLAGRSCGMY
GLKGPDIYKGVYQFKSVEFDMSHLNLTMPNACSANNSHHYISMGTSGLELTFTNDSIISH
NFCNLTSAFNKKTFDHTLMSIVSSLHLSIRGNSNYKAVSCDFNNGITIQYNLTFSDRQSA
QSQCRTFRGRVLDMFRTAFGGKYMRSGWGWTGSDGKTTWCSQTSYQYLIIQNRTWENHCT
YAGPFGMSRILLSQEKTKFFTRRLAGTFTWTLSDSSGVENPGGYCLTKWMILAAELKCFG
NTAVAKCNVNHDAEFCDMLRLIDYNKAALSKFKEDVESALHLFKTTVNSLISDQLLMRNH
LRDLMGVPYCNYSKFWYLEHAKTGETSVPKCWLVTNGSYLNETHFSDQIEQEADNMITEM
LRKDYIKRQGSTPLALMDLLMFSTSAYLVSIFLHLVKIPTHRHIKGGSCPKPHRLTNKGI
CSCGAFKVPGVKTVWKRR
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgggtcagattgtgacaatgtttgaggctctgcctcacatcatcgatgaggtgatcaac
attgtcattattgtgcttatcgtgatcacgggtatcaaggctgtctacaattttgccacc
tgtgggatattcgcattgatcagtttcctacttctggctggcaggtcctgtggcatgtac
ggtcttaagggacccgacatttacaaaggagtttaccaatttaagtcagtggagtttgat
atgtcacatctgaacctgaccatgcccaacgcatgttcagccaacaactcccaccattac
atcagtatggggacttctggactagaattgaccttcaccaatgattccatcatcagtcac
aacttttgcaatctgacctctgccttcaacaaaaagacctttgaccacacactcatgagt
atagtttcgagcctacacctcagtatcagagggaactccaactataaggcagtatcctgc
gacttcaacaatggcataaccatccaatacaacttgacattctcagatcgacaaagtgct
cagagccagtgtagaaccttcagaggtagagtcctagatatgtttagaactgccttcggg
gggaaatacatgaggagtggctggggctggacaggctcagatggcaagaccacctggtgt
agccagacgagttaccaatacctgattatacaaaatagaacctgggaaaaccactgcaca
tatgcaggtccttttgggatgtccaggattctcctttcccaagagaagactaagttcttc
actaggagactagcgggcacattcacctggactttgtcagactcttcaggggtggagaat
ccaggtggttattgcctgaccaaatggatgattcttgctgcagagcttaagtgtttcggg
aacacagcagttgcgaaatgcaatgtaaatcatgatgccgaattctgtgacatgctgcga
ctaattgactacaacaaggctgctttgagtaagttcaaagaggacgtagaatctgccttg
cacttattcaaaacaacagtgaattctttgatttcagatcaactactgatgaggaaccac
ttgagagatctgatgggggtgccatattgcaattactcaaagttttggtacctagaacat
gcaaagaccggcgaaactagtgtccccaagtgctggcttgtcaccaatggttcttactta
aatgagacccacttcagtgatcaaatcgaacaggaagccgataacatgattacagagatg
ttgaggaaggattacataaagaggcaggggagtacccccctagcattgatggaccttctg
atgttttccacatctgcatatctagtcagcatcttcctgcaccttgtcaaaataccaaca
cacaggcacataaaaggtggctcatgtccaaagccacaccgattaaccaacaaaggaatt
tgtagttgtggtgcatttaaggtgcctggtgtaaaaaccgtctggaaaagacgctga

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