KEGG   Vibrio gazogenes: BSQ33_13460
Entry
BSQ33_13460       CDS       T04933                                 
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
vga  Vibrio gazogenes
Pathway
vga00730  Thiamine metabolism
vga01100  Metabolic pathways
vga01240  Biosynthesis of cofactors
vga04122  Sulfur relay system
Module
vga_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:vga00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    BSQ33_13460
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    BSQ33_13460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vga03016]
    BSQ33_13460
Enzymes [BR:vga01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     BSQ33_13460
Transfer RNA biogenesis [BR:vga03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    BSQ33_13460
SSDB
Motif
Pfam: ThiI THUMP Rhodanese QueC Transcrip_reg
Other DBs
NCBI-ProteinID: ASA56599
UniProt: A0A1Z2SHD3
Position
1:2930535..2931983
AA seq 482 aa
MKFIVKPHPEIFVKSESVRKRFTKILECNIRNIIQRRTESVAVFNRRDHIEVTSESDQYY
AETLEILTHTPGIHHVLEVKQSDFSDLHDIYEQVLAHSRHLIENKTFVVRAKRRGQHDFT
SIELERYVGGGLNQAVESARVKLNKPDVVVRVEVSGEKLNQIIARHRGLGGFPLGTQEDV
LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQVAYYLWNKFGSSAKVRFI
AVDFEPVVAEILEKVDDGQMGVVLKRMFMRAAGMIAERFDIQALVTGEALGQVSSQTLTN
LRHIDGVTERLILRPLINWDKEDIINLARDIGTEDFAKTMPEYCGVISRRPTVKAVQAKL
EAEEAKFDFSILDQVIYNARQMDIRNIAQETEQQAPEVELVDAIQENAVVLDIRSPDEED
EHPLILEGVEVKHLPFYKLATQFGDLDQSKTYLLYCARGVMSRLQALYLKEQGFENVKVY
RP
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaaatttattgttaagccccatccggaaatttttgttaaaagtgaatcggtgcggaaa
cgttttaccaaaattctcgaatgtaatattcgcaatattattcaacgccgaacggaatcg
gttgcggtatttaaccgtcgtgatcatattgaagtcacttcagagagcgatcaatattat
gcagaaacactcgagattttgacgcatacaccgggcattcatcatgtgctggaagtgaag
cagtctgatttcagtgacctccatgatatttatgagcaagtgttagcgcacagtcggcat
ctgattgaaaacaaaacctttgtggtccgtgcgaaaagacgcggtcagcatgattttacc
tcgatagagctggaacgctacgttggtggtggcctgaaccaagcggtagaaagtgcccgg
gtgaagcttaacaaacctgatgtggtcgttcgggttgaagtttccggtgagaaactgaac
caaattattgcacgtcatcgtggtttggggggcttcccgctcggaacacaagaagatgtc
ttgagcctgatttccggtggattcgattctggcgtttccagttatctgcatatcaaacgc
ggttcaaaagtccattattgtttctttaatttaggtggcccggcacatgaaataggcgta
aagcaggttgcttattatttgtggaataagtttgggtcgtcggccaaggtccgtttcatt
gccgttgattttgaacccgtcgtggcggaaattctggaaaaagtcgatgacggacagatg
ggcgtggtgctcaaacggatgttcatgcgggcagccggtatgatcgctgagcggtttgat
attcaggcgctggtgactggtgaagcgttagggcaggtttcgagtcagacgctgactaat
ttacgtcatattgatggtgtgactgagcgtttgattttacgtccgctgattaactgggat
aaggaagacattatcaaccttgccagagatatcgggactgaagactttgccaaaacgatg
ccggaatattgcggggtgatttcccgtcgtccgacggtcaaagcggttcaggcaaaactg
gaagcagaagaagcgaagtttgatttttcaattttagatcaagtgatctacaacgcacgt
cagatggatatccgaaatatcgctcaggaaaccgagcagcaggcaccggaagttgaattg
gttgatgccattcaggaaaatgccgtcgtgttggatattcgtagtccggatgaagaagat
gagcatccgctgattctggaaggggtcgaagtgaaacatctacctttctataagctggca
actcagttcggtgatttggatcagtcaaaaacctatttactgtactgcgcgcgcggcgtc
atgagccgtttgcaagcgttgtatcttaaagaacaggggtttgagaatgtgaaggtctat
cgcccttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system