KEGG   Vibrio gazogenes: BSQ33_14330
Entry
BSQ33_14330       CDS       T04933                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
vga  Vibrio gazogenes
Pathway
vga00040  Pentose and glucuronate interconversions
vga01100  Metabolic pathways
vga02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vga00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    BSQ33_14330
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BSQ33_14330
Enzymes [BR:vga01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     BSQ33_14330
SSDB
Motif
Pfam: Pectate_lyase_4 F5_F8_type_C
Other DBs
NCBI-ProteinID: ASA57227
UniProt: A0A1Z2SJF4
Position
1:3123437..3124924
AA seq 495 aa
MVASVISSLAWVALPSLANGFHTENGGTTGGEGGQVVHATTGTQIHAALCNRASSDTPII
IQVEGTINHGNTSKVSGPSCNTAADKIELKNISNVTLIGVGQGALFDELGIHIRSSSNII
IRNVHVRNVKKSGFPTSNGGDAIGMEKDVSNVWVDHVTLEASGGESDGYDALVDMKNDTK
YVTVSYSILRNSGRGGLVGSSDSDDNNGPVTFHHNYYENINSRTPLLRHATAHSYNNYYD
GLISSGMNPRIGGKIKAENNYVKDSKDPLGTFYTNDMGFWDVSGNIWNNVRWSNDGNKVH
PAGPNPVSTTSIRIPYQYQPDQASCVPAIVMATAGANKGLAVSDGHCHVAPGDDHSGNGN
DNGGGQDNGGGSTSGSNLALNAGADGSSKGNGTSYGNVTDGDSSTYWSPRGTTGTISVKR
LNQTINAVRIIELSGTQGTVTSWSLVNHDDGATLASGNSIPSVISFPNTNLDKISFVIHS
ASGTPAIAEFEVYKN
NT seq 1488 nt   +upstreamnt  +downstreamnt
atagtcgcttcggtaatatcatcgctggcatgggtcgcgttaccttcacttgcgaatggc
ttccacactgaaaatggcggaacaacaggcggagagggaggacaagtcgttcatgctaca
accggtacgcaaattcatgctgcgttatgtaaccgagcttctagcgatacaccgatcatt
attcaggtcgaaggcacgattaaccatggtaatacttcaaaggtttccggcccgagttgt
aacaccgctgcggataaaattgagctgaaaaatatcagcaatgtcaccttgatcggggtc
ggtcagggagcgctatttgatgaacttgggattcatattcgttcttcatccaacatcatc
attcgcaatgtgcatgtcagaaatgtgaagaaatctggttttccgacgtcgaatggcggt
gatgctatcgggatggagaaagatgtctcaaacgtctgggttgatcatgtcacactagaa
gcgagtggtggtgaaagtgatggctatgacgcgttggttgatatgaagaatgataccaag
tacgtcaccgtctcttacagtattctgagaaattctggccggggcggtctggttggttca
agtgacagtgatgataataacgggccagtcactttccaccataactactatgagaacatt
aattcacggacacccctgttacgccatgcgacagcacattcttataacaattattatgat
ggcttaatttcttcagggatgaacccaagaattggcgggaagatcaaagcagaaaataac
tatgtgaaagattctaaagacccgctcggtactttctataccaatgacatgggattctgg
gatgtgagtggcaatatttggaataatgtgcgttggtctaatgatggcaacaaagttcat
ccggctgggccaaatccggtttcgaccacttcgattcgtattccttatcaatatcagcca
gatcaggcaagctgtgttccagcgattgtgatggcaaccgcgggtgcaaataaaggcctg
gctgtttctgatggtcattgtcatgtggctccgggagatgatcattctggaaatggaaac
gataatggtggcggtcaggataacggcggtggttcaacttcaggttcaaacctcgcctta
aatgcaggtgctgacggtagttctaaaggtaacggaaccagctatggtaacgtgacagac
ggagatagcagtacctactggtcaccaagaggcacaaccggcacaattagcgttaaacgt
ctcaaccaaaccattaatgcagttcgaatcattgaactgtctggtactcagggcacagtc
acgtcttggtctttagtgaatcatgatgatggtgccactctggcatcgggaaattctatt
cccagtgttatctcattcccgaatacgaatctggataaaatcagttttgtgattcactca
gccagcggcacgcctgcgattgctgagtttgaagtgtataaaaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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