KEGG   Vibrio gazogenes: BSQ33_14805
Entry
BSQ33_14805       CDS       T04933                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
vga  Vibrio gazogenes
Brite
KEGG Orthology (KO) [BR:vga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vga03032]
    BSQ33_14805
   03036 Chromosome and associated proteins [BR:vga03036]
    BSQ33_14805
   03400 DNA repair and recombination proteins [BR:vga03400]
    BSQ33_14805
DNA replication proteins [BR:vga03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BSQ33_14805
Chromosome and associated proteins [BR:vga03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BSQ33_14805
DNA repair and recombination proteins [BR:vga03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BSQ33_14805
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: ASA56837
UniProt: A0A1Z2SIB4
Position
1:3235405..3235677
AA seq 90 aa
MNKTQLIDKIASDAEISKASAGRALDAFIDAVGGTLESGEQVALVGFGTFSVRTRAARTG
RNPKTGDEIQIPEAKVPAFKAGKALKDACN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaaacacaattaatcgataaaattgcgtcagatgctgaaatctctaaagcatct
gcgggccgtgctcttgatgcattcattgatgcagtgggtggtacactcgagtctggtgag
caagttgctctggttgggtttggaacattcagtgtccgtactcgcgcagcccgtactggc
cgtaatccgaaaacaggggatgagatccaaatccctgaagctaaagtacctgctttcaaa
gctggtaaagcactgaaagacgcgtgtaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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