KEGG   Variibacter gotjawalensis: GJW-30_1_04288
Entry
GJW-30_1_04288    CDS       T05320                                 
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
vgo  Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:vgo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vgo03400]
    GJW-30_1_04288 (addA)
Enzymes [BR:vgo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GJW-30_1_04288 (addA)
DNA repair and recombination proteins [BR:vgo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     GJW-30_1_04288 (addA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 AAA_12
Other DBs
NCBI-ProteinID: BAT61727
UniProt: A0A0S3Q0M0
Position
complement(4364117..4367551)
AA seq 1144 aa
MAAPKKIPEKLEAAQFKASDPAGSAWVSANAGSGKTYVLAQRVTRLLLNGVDPSKILCLT
FTKVAAANMALRVFKTLASWTTMDDASLRAEIGKIERKPPDAARLLRARRLFAETLETPG
GLKVQTIHAFCSALMHQFPFESGVSAGFEVMEERAQDELINLLRIEVLLEAAQKPGTGLA
TALSTALIVAADITFSDVVKQAVMRRSAYEAWLKRAESAEAALEELNVTFGVAANDTTDV
IDAEILARGLPRTDWANAAAVFAEGSESDKKQGARLRRALSNGGSGLDDYLDVFCTEDGM
RKSLATKGLAADYPELMARLDVEKERLAGLMERRRAIVARDRAAALATVTFEIVTRYRSE
KSRRGLLDYDDLIEKTRALLDAYGSAWVMYRLDLGIDHLLIDEAQDTSPSQWDVITMLTA
EFFAGQGARAHVRRSIFAVGDEKQSIYSFQGAAPHLFDEKRQHYEKLHKRAKLTFSRVPL
RHSFRSTVDVLGAVDEVFKDPRAHAGLAHDPVATLHEAVRADAPGSIEIWPLADPPERKQ
PEPWDAPFDAVSEESPPVILARRIARYVASAIAAKEPVEARDGAPLRPGDILILVRQRGP
LFEAVIRALKVANVEVAGADRLVLTDHIAVMDLMALADALLMRDDDLALAEVLKSPLFGF
DDDALFALAYGRGKKPLRDVLDGAADPRFAKVAARFKELEQCARSEGAFDFYARLLGADG
GRRQILARLGHEADDALDEFLALAIDYERNNPPSLQGFVAWLRAANAEVKRDMDVARDEV
RVMTVHGAKGLEAPIVILADTTNLPRGPEPSIVSATAREDSPLLWLGRKQEDAAAGNAAR
LTAHRAAEHEHLRLLYVAMTRAQDKLIVCGARRQKKNPENCWYDLVSEALKPGAVERRAP
DGEIVWRWQKSPELLGLPRPKPVVVTAAPEAPPAWLRQPIAAASQDARISPSQALAKRRA
RSPEQEAAALRARERGVVVHRLLQSLPDVGPEHRKTAAETFLAQRSALLPAEERASIIAN
VMSIVSNARFAAVFAPGSQAEVPLVGTLTKLNGETFTVSGQIDRLAVTEQDVLIADFKTD
RDAGKGGSLAQYATQLALYRALLGPLYPNRTIRAVLIWTETAQAQEITAEFLDRAAVEFG
LAGS
NT seq 3435 nt   +upstreamnt  +downstreamnt
atggcggcgccgaagaaaattcccgagaagttggaggcggcgcagtttaaggcgtcggac
ccggccggctcggcttgggtgtcggccaatgcgggttccggcaagacttacgttcttgcg
cagcgcgtgacgcgtctgctgctcaatggcgtcgacccgtcgaaaatcctttgccttacc
ttcacgaaagtcgcggccgcaaatatggcactgcgcgttttcaaaacgctcgcctcgtgg
acgacgatggacgacgcgagcttgcgcgccgagatcggcaagattgagcgcaagccgccg
gatgcggcgcgtctactgcgcgcgcgccgcttgttcgccgagacgcttgagacgccgggc
ggtttgaaggttcagacgatccacgctttctgcagtgcgctgatgcatcagttcccgttc
gaatccggagtttcggccgggttcgaggtgatggaggagcgcgcacaggatgaattgatc
aatctgctgcgcatcgaggtgttgctcgaggcggcgcagaagcccggtacaggtctcgcg
actgcgctttcgacggcgttgatcgtcgcggccgacattaccttctcggatgtggtgaag
caggccgtgatgcgccgctcggcctatgaggcatggctcaaacgcgccgagagcgccgag
gctgcgcttgaagagcttaacgtgacgttcggcgttgcggcgaacgatacaacggacgtc
atcgatgcggagatcttggcgcgcggactgccgcgcaccgattgggcgaatgctgccgca
gtgttcgcggaaggctctgaatccgacaagaaacagggcgcacgcctgcgccgtgccttg
tccaacggcggcagcggtctcgacgattatctcgatgtcttctgcaccgaagatggcatg
cgcaagagcctggccacgaaagggctcgcagccgactatccggaattgatggctcggctc
gatgtcgagaaggagcgacttgccggactgatggagcggcgtcgcgcgatcgtcgcgcgc
gatcgtgcggctgcgctggcgacggtgacattcgagatcgtcacgcggtatcgcagtgaa
aagtcgcggcgcggcttgcttgactacgatgacctcatcgagaagacgcgcgcgttgctc
gacgcttacggatcggcctgggtgatgtatcgtcttgatctcggcatcgaccatctcctc
atcgacgaagcgcaggatacaagcccttcgcagtgggacgtcattacgatgctgacagcg
gaattcttcgcgggccaaggcgcgcgcgcgcatgtccgtcgcagcatcttcgcggtgggt
gacgagaagcaatccatctattcgtttcaaggggcggcgccacatctgttcgacgagaag
cggcagcactacgagaagcttcacaagcgcgcgaagctgacgttctcgcgcgtgccgcta
cggcactcgttccgttcgactgtcgacgtgctcggcgcggtcgacgaagtattcaaggat
ccgcgtgcacatgcgggtctcgcgcatgatccggtcgcgacgctgcacgaagcagtgcgc
gccgacgctcccgggagcatcgagatttggccgctggccgatccgcccgagcgcaaacag
cctgagccgtgggatgcgccattcgacgcggtgagtgaagagagcccgccggttattctg
gcgcggcgtatcgcgcgttatgtcgcgagtgcaattgcagcaaaagagccggtcgaggcg
cgcgacggcgcgccgctacgtcccggcgatattttgattttggttcgccagcgcgggccg
ttgttcgaagccgtgatccgcgcgctgaaggtcgcgaatgtcgaggtcgcgggcgctgac
cgcctcgtactcacggaccatatcgccgtgatggatttgatggcgctcgccgacgcgttg
ctgatgcgcgatgacgatctcgcgctcgccgaagtgctgaagagtccgttgttcggtttc
gacgacgatgcgctgttcgcactcgcatatgggcgcggaaaaaagccattgcgcgatgtg
ctcgacggcgcggcggacccgcgtttcgccaaagtcgctgcgcgattcaaagagctggaa
caatgtgcgcgtagcgaaggcgctttcgatttttacgcgcgcctgctcggcgcggatggc
ggtcgccggcaaatcctcgcgcgacttggtcacgaggccgacgacgcgctggacgagttt
cttgcgctggcgatcgactatgagcggaacaatccgccgtcgctgcaagggtttgtcgcg
tggctgagggccgcgaatgctgaagtcaaacgcgacatggacgtcgcgcgcgacgaggtg
cgcgtgatgacggtgcacggcgcgaaaggtctcgaagcgccgatcgtcattctggccgac
acgacgaatctgccgcgtggaccggagccgagcatcgtgtcggcgacggcgcgcgaggac
tcgccgttgctgtggctcgggcgcaaacaagaagatgccgctgcgggcaatgcggcacgg
ctcacggcgcatcgcgccgccgagcacgagcatttgcggttgctctacgttgcgatgacg
cgtgcacaagacaaactgatcgtttgcggcgcgcggcggcaaaagaagaacccggagaac
tgctggtacgatctcgtcagcgaggcgttgaagcccggcgcggtcgagcggcgtgcgccg
gatggcgagatcgtttggcgctggcagaagtcgccggaattgcttggattgccacggccg
aagcctgtggtcgttacggccgcgccggaagcaccgccggcgtggttgcgtcaacccatt
gccgcggcaagtcaggatgcgcgcatttcgccgtcgcaagcgctggcgaagcgccgagca
cgttcgcccgagcaggaagctgccgcattgcgcgcgcgtgagcgtggcgtcgtcgtgcat
cgccttctgcaatcgctgcccgatgtcggaccggagcatcgcaaaacggcggcggagact
tttctcgcgcaacgcagtgcgctgctgccggccgaagagcgtgcatccatcatcgccaac
gtgatgagcatcgtcagtaatgctcggttcgcggccgtgttcgcacctggtagccaagcc
gaggtgccgctcgtcggtacgctgacgaagctgaatggtgagacgtttacggtctcgggt
cagatcgatcgcctcgctgtcactgagcaggacgtcttgatcgccgacttcaaaaccgac
cgcgatgccggcaaaggcggcagccttgcgcaatatgcaacgcagctcgcgctctaccgg
gccttgttgggtccgctctacccaaaccgcaccatccgagctgtgctgatttggaccgag
accgcgcaagctcaagaaatcactgcagaattcctggatcgcgcggcggtggaattcggc
ttggcggggtcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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