KEGG   Vibrio campbellii ATCC BAA-1116: VIBHAR_00094
Entry
VIBHAR_00094      CDS       T00589                                 
Name
(GenBank) hypothetical protein
  KO
K03666  host factor-I protein
Organism
vha  Vibrio campbellii ATCC BAA-1116
Pathway
vha02024  Quorum sensing
vha03018  RNA degradation
vha05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vha00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VIBHAR_00094
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VIBHAR_00094
   05111 Biofilm formation - Vibrio cholerae
    VIBHAR_00094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vha03019]
    VIBHAR_00094
   03036 Chromosome and associated proteins [BR:vha03036]
    VIBHAR_00094
Messenger RNA biogenesis [BR:vha03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     VIBHAR_00094
Chromosome and associated proteins [BR:vha03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    VIBHAR_00094
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ABU69154
UniProt: A7MX76
Position
I:complement(98174..98437)
AA seq 87 aa
MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS
TVVPARPVSHHSGDRPQGDRPQEKSED
NT seq 264 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctctacaagacccattcctaaatgcgctacgtcgtgagcgtatc
ccggtatctatctaccttgtgaacggtatcaaactgcaaggtcagatcgaatctttcgat
cagttcgtgatcctattgaagaacactgttaaccaaatggtgtacaagcacgcaatctct
accgttgttccggctcgtccagtgagccaccacagtggtgatcgtcctcaaggtgaccgt
ccacaagagaaatctgaagattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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