KEGG   Vibrio campbellii ATCC BAA-1116: VIBHAR_00175
Entry
VIBHAR_00175      CDS       T00589                                 
Name
(GenBank) hypothetical protein
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
vha  Vibrio campbellii ATCC BAA-1116
Pathway
vha05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vha00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VIBHAR_00175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vha03000]
    VIBHAR_00175
   03036 Chromosome and associated proteins [BR:vha03036]
    VIBHAR_00175
   03400 DNA repair and recombination proteins [BR:vha03400]
    VIBHAR_00175
Transcription factors [BR:vha03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    VIBHAR_00175
Chromosome and associated proteins [BR:vha03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    VIBHAR_00175
DNA repair and recombination proteins [BR:vha03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      VIBHAR_00175
SSDB
Motif
Pfam: HTH_8 HTH_30 Xre-like-HTH DUF134 HTH_28
Other DBs
NCBI-ProteinID: ABU69223
UniProt: A7N080
Position
I:178501..178797
AA seq 98 aa
MFEQNLTSEALTVTTVTSQDQITQKPLRDSVKASLKNYLAQLNGQEVTELYELVLAEVEQ
PLLDTIMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN
NT seq 297 nt   +upstreamnt  +downstreamnt
atgttcgaacaaaatctgacttcagaagcattaacagtaactacagtaacgtcacaagac
cagattactcaaaagcctttacgtgactctgttaaagcgtctcttaaaaactacctagct
caactaaacggccaggaagtaacagaactatacgaattagttctagctgaagttgaacag
ccactactagataccatcatgcagtacactcgcggtaaccagactcgcgcagcaactatg
atgggtatcaaccgcggtactcttcgcaagaaacttaaaaaatacggcatgaactaa

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