KEGG   Virgibacillus halodenitrificans: BME96_00010
Entry
BME96_00010       CDS       T04548                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
vhl  Virgibacillus halodenitrificans
Pathway
vhl03030  DNA replication
vhl03430  Mismatch repair
vhl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vhl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BME96_00010
   03430 Mismatch repair
    BME96_00010
   03440 Homologous recombination
    BME96_00010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vhl03032]
    BME96_00010
   03400 DNA repair and recombination proteins [BR:vhl03400]
    BME96_00010
Enzymes [BR:vhl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BME96_00010
DNA replication proteins [BR:vhl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BME96_00010
DNA repair and recombination proteins [BR:vhl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BME96_00010
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: APC46688
UniProt: A0A6L8K0A9
Position
1564..2700
AA seq 378 aa
MKFIIQRDQLIASIQDVMKAISSRTVVPILTGMKIEVKQHGITLTGSDSDISIESYIPAE
EDGNVNVEQIEEGSIVLQAKYFPDIVRKLPEKTVEIEADENLKVTIRSGKAEFNLNGQDA
EEYPQLPKLQTDDSFELPTDLLKSLIKQTVFAVSTMETRPILTGVHIKLEEGNLTFTATD
SHRLASREVPVSDSNTAFPSVVVPGKSLNELNKILDDTEEPVEISVTNNQILFRAKNLNF
LSRLLDGNYPETSRLIPEQSKTVLYAKTKELLNTIDRASLLAKEERNNVVRLNTQGDNVI
NITGNSPEVGTVSEEIVVQSMEGEELKISFSSKYMIDALKAIEYEEVKVEFTGAMRPFII
RPANEDPILQLILPVRTF
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgaaatttattattcaacgtgatcaattaattgcaagcatacaggatgtaatgaaagca
atatcttcaagaacagttgtaccgatattaactggaatgaaaattgaagtgaaacaacat
ggaattacactaacaggaagtgattctgatatatccattgaatcctatataccagctgag
gaagatggaaatgtaaatgtagagcaaattgaagaaggcagtattgtcttacaagcaaaa
tatttccctgatattgttcgtaaattaccagaaaaaacagttgagatcgaggctgatgaa
aacttaaaggtcactattcgctctggtaaagctgaatttaatcttaatggacaagatgca
gaggaatatcctcagcttcctaaactgcaaacagatgatagctttgaattaccaacagat
ttacttaaaagtttaataaagcaaactgtattcgctgtttcaacaatggaaacacggccc
atcttaacaggggttcatattaaactggaagaaggaaatttaacatttactgctacagac
agtcaccgtcttgcttcccgcgaagtaccagtaagtgattcgaacacagcatttccttca
gtagttgttcctggtaaaagccttaatgaattaaataaaattctcgatgatacggaagaa
ccagtagaaataagtgtgacaaataaccaaattcttttccgtgcaaagaaccttaatttt
ctctcacgtttattagatggtaactacccggaaacttctcgcttaattccggagcaaagt
aaaacggtattgtatgccaaaacaaaagaattactaaacacgattgatcgtgcatctctt
ttagccaaagaagaaagaaataatgttgttcgtttaaacactcaaggggataatgtaatt
aatattacagggaattccccggaagtaggtactgtttcagaagaaatcgtggttcaatcc
atggaaggcgaagaattaaaaatttccttcagctccaaatatatgattgatgcattaaaa
gcaattgaatatgaagaagtaaaagtagagtttacaggagctatgcgcccattcattatt
cgacctgcaaatgaagatccaattttacaacttatcttaccagtacggacattttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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