KEGG   Vibrio harveyi: AL538_03865
Entry
AL538_03865       CDS       T04380                                 
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
vhr  Vibrio harveyi
Pathway
vhr03030  DNA replication
vhr03430  Mismatch repair
vhr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AL538_03865 (holB)
   03430 Mismatch repair
    AL538_03865 (holB)
   03440 Homologous recombination
    AL538_03865 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vhr03032]
    AL538_03865 (holB)
   03400 DNA repair and recombination proteins [BR:vhr03400]
    AL538_03865 (holB)
Enzymes [BR:vhr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AL538_03865 (holB)
DNA replication proteins [BR:vhr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AL538_03865 (holB)
DNA repair and recombination proteins [BR:vhr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AL538_03865 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNApol3-delta_C DEAD
Other DBs
NCBI-ProteinID: AMF96930
UniProt: A0A3A1Q0P5
Position
1:complement(804504..805466)
AA seq 320 aa
MLNDFPWLQPVWDNLKISLDSERVPGALLLQSEKGLAVEKLVELFSHSLLCQNYTSEACG
FCHSCQLTQSNSHPDLHWVKPEKEGKSITVDQIRACNRLAHESSQLNGYRVFIIEPAEAM
NESASNALLKTLEEPGQKCLFLLVTQNHERLLPTIQSRCQQWVVATPSTEQAMSWMSEQG
ASQVPPYALKLNMGSPINTLEAAKSGELDEYQAFERCLIETLSSPLSDVFQCATLMAKNP
DKALDWAWYLLTDAQKAQFGVTEVDLLPGAAQFQPGRYNGLYQAAQKLLELKAQRQTFPG
LNLELLSMNWLIESREALCS
NT seq 963 nt   +upstreamnt  +downstreamnt
atgttaaatgactttccatggttacagcccgtttgggataacctcaaaatcagtttggat
tcagagcgagttcctggagctttgttactacaaagtgagaaagggttggccgttgaaaaa
ctggttgaactcttcagccactctcttttgtgccaaaactacaccagtgaggcgtgtggt
ttttgccacagttgtcagctaactcaatctaatagtcatccagacttacattgggttaag
ccggaaaaagaaggcaaatcgattacggttgatcagatccgcgcttgtaatcgtcttgct
catgaatcatcacagctaaatggatatcgcgtgttcattatcgaacctgcggaagcaatg
aacgagtctgcgtccaatgcgttgttgaaaacactagaagaaccagggcagaagtgtttg
ttcttgcttgttacacagaaccatgagcgattactgccaacgattcaaagtcgctgtcag
caatgggtcgtggctacgccttcaacagagcaagctatgagctggatgagtgagcaaggg
gcttctcaagtgcccccttatgcgcttaagttgaatatgggttcaccaataaatacgctg
gaagcagcaaaaagtggtgagctggatgagtatcaagcgtttgagcgctgcttgattgag
actttgtcttcgcctttgtcagatgtgtttcagtgcgcgacgttaatggctaagaatcca
gacaaagcgttagactgggcgtggtatttgttgaccgatgctcagaaagcgcaatttggt
gttacggaagtggatctgcttcctggcgccgctcagtttcagcccggtagatataacggt
ctgtatcaagcggcccaaaagctgcttgaattgaaagcccaacgacaaacctttccaggc
ttaaaccttgagctactatctatgaattggttaattgaatcacgagaggcattatgttcg
tag

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