KEGG   Vibrio harveyi: AL538_13055
Entry
AL538_13055       CDS       T04380                                 
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
vhr  Vibrio harveyi
Pathway
vhr00550  Peptidoglycan biosynthesis
vhr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AL538_13055
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vhr01002]
    AL538_13055
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vhr01011]
    AL538_13055
Enzymes [BR:vhr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     AL538_13055
Peptidases and inhibitors [BR:vhr01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   AL538_13055
Peptidoglycan biosynthesis and degradation proteins [BR:vhr01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   AL538_13055
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Beta-lactamase TfuA
Other DBs
NCBI-ProteinID: AMF98585
UniProt: K5TR24
Position
1:complement(2777700..2778878)
AA seq 392 aa
MNKNKFVKSILVSSVALSATIAQSAFASPVVVPDAPQIAAKGYVLMDYNSGKVLAEKEMN
TKLSPASLTKMMTSYVIGQELARGNISEDDDVTISKNAWAKNFPDSSKMFIEVGTTVKVK
DLNRGIIIQSGNDACVAMAEHIAGSEDAFVDLMNAWADTIGMTNTHFANVHGLDNPNLYS
TPYDMALLGKALIRDVPDEYRIYSQKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNA
GYSLVSSATEGQMRLVAVVMGTKDANARKSESKKLLSYGFRFFETVAPHKAGETFVEEKI
WMGNKDTIALGLDQDTYVTLPRGEAKNLKASFVLEKELEAPIKKGDVVGKLYYQIDGEDI
AEYPLMALETVDQGSLFSRMWDYIVLLFKSFF
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgaataaaaataagtttgtgaaatctattctcgtttcttcggttgcactatcagcaacc
atcgctcaatctgcttttgcttcaccagttgttgtcccagatgctcctcaaatcgcagcc
aaaggctacgtacttatggattacaactcaggtaaagttctggctgagaaagagatgaac
acaaaattgtctcctgctagtctgacaaaaatgatgaccagctacgtaattggccaagag
ctagcgcgtggtaatatttcagaagacgatgatgtaaccatcagtaagaatgcttgggcg
aaaaacttccctgactcttcaaaaatgttcattgaagttggcacgacggtaaaagtaaaa
gacctgaaccgtggcatcatcatccaatctggtaacgatgcgtgtgtggcaatggctgaa
cacattgctggttcagaagatgcattcgttgatctaatgaatgcttgggcggatacgatc
ggtatgacgaacacgcactttgcgaacgttcacggtctagacaaccctaacctatactca
acaccttacgatatggcactgcttggtaaagcactgatccgtgacgtaccagacgagtac
cgtatttactctcaaaagaaattcacttacaacggcatcactcagtacaaccgtaacggt
ctactgtgggataagagcatgaatgttgacggtatcaaaacgggtcacacaagcaatgct
ggttatagcctagtaagctctgcaacagaaggtcaaatgcgcctagttgcggttgtaatg
ggaacaaaagatgcgaatgcacgtaaatcagaaagtaaaaagcttctgagctacggtttc
cgtttcttcgaaacagtggcacctcataaagcgggtgaaactttcgtagaagaaaaaatc
tggatgggtaacaaagacaccattgctctgggtcttgaccaagatacctacgtaacccta
cctcgcggcgaagcaaagaacctaaaagcaagcttcgtacttgaaaaagaacttgaagcc
ccaattaagaaaggtgatgtagttggtaagctatactatcaaattgatggtgaagatatt
gctgagtacccactaatggcactggaaacagtagaccaaggcagcctatttagccgcatg
tgggactacatcgtattgttgtttaagagcttcttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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