KEGG   Vibrio harveyi: AL538_15485
Entry
AL538_15485       CDS       T04380                                 
Name
(GenBank) alginate lyase
  KO
K01729  poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
Organism
vhr  Vibrio harveyi
Pathway
vhr00051  Fructose and mannose metabolism
vhr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00051 Fructose and mannose metabolism
    AL538_15485
Enzymes [BR:vhr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.3  mannuronate-specific alginate lyase
     AL538_15485
SSDB
Motif
Pfam: Chondroitinas_B Beta_helix NosD
Other DBs
NCBI-ProteinID: AMF99018
UniProt: A0A454B9W5
Position
1:complement(3296803..3298419)
AA seq 538 aa
MKKTMLAGVVAASISALTLVGCNTSPSQTTEAAAPAVVETAVNDITRDYLLATDRLNTVD
GSALQAQSADTVQALKQQMENAADGTIITIPAGKYADLDIVTVKANDITIKAEQPGSVWL
TGLAQLRLEGNNITVDGLVFTKGGPAERFGGVRMMGNNNTLQNSTFYYFNHAYEYQPDER
RSEYPKYLWVSLWGKDGKVINNRFEGKQKRGTLIGVQKDDTPDNHLIANNIFLDQKPNQF
NEFDIKDAIRYNGNSWEAIRIGDSKSSQWASNSKFTNNLLIDMDGERELISIKSGGNEIS
GNTIFESASLISLRHGKANVVKDNVILGNEKLLTGGMRIYDEDHVIENNYITGTRGRDGK
IEGNADLRGGIVINTGIIDVANGEKLDQAVKGKELNKQWTPKNITIRNNTLVDTEWGIVY
GNQTHRVSLFNNSEVKNIFAGVDVHFDSNVVDNHQQKQFVSVRATEELPLVNPTYNNEVY
VGTVTNAEQIASYSVELPKSEQAKGFTQYQGVGADTSKLSVVTAETAGPDYLLANTQK
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgaaaaaaacaatgcttgctggcgtggttgccgcgtccatttctgccctaaccctagta
ggttgtaacacttcaccttctcaaaccacggaagccgcggctcccgctgttgttgaaacc
gcagtgaatgacatcactcgcgattacttgcttgctacggatcgcttaaacacagtggat
ggcagcgcacttcaagcgcaatccgcagacaccgtgcaagcattgaaacaacaaatggag
aatgccgcagacggtacaataattacgattcctgcgggtaaatacgcggatcttgatatc
gtcacggtaaaagccaacgacattaccatcaaggcggagcaacctggcagtgtttggcta
acgggtttggctcagcttcgtcttgaaggtaacaacatcactgtcgacggtttggtgttt
accaaaggcggtcctgctgaacgtttcggtggtgtgcgtatgatgggtaacaacaacact
ttacaaaactctacgttctactacttcaaccacgcttacgaataccaaccggacgaacgt
cgctcggaatacccgaaatacttgtgggtttcactttggggtaaagatggcaaggtgatc
aataaccgttttgaaggtaagcaaaagcgcggcactttgattggtgtacaaaaagatgac
acaccagataaccaccttattgctaacaacattttcttggaccaaaagccaaatcagttc
aatgaattcgacatcaaagatgcgattcgttacaacggtaacagctgggaagcaattcga
atcggcgattcaaaatcgtctcaatgggcgtcaaactctaagttcaccaataacctgctg
attgatatggatggtgaacgcgagctgatttcgattaagtcaggtggcaatgaaatctct
ggcaatactatctttgaaagtgcgtctctgatttctcttcgtcacggtaaagcgaacgta
gtgaaagacaacgtgattctaggtaacgaaaaactgcttactggcggtatgcgtatttac
gatgaagaccacgtgatcgagaacaactacatcactggcacgcgtggccgtgatggcaaa
attgaaggcaatgcggatctacgtggcggcatcgtaatcaatacgggcatcattgatgtg
gcaaacggcgagaagctcgaccaagcagtgaaaggcaaagagctcaacaagcaatggaca
ccaaagaacatcaccattcgtaacaacacccttgtagatacggaatggggcattgtctac
ggcaaccaaacgcaccgtgtgagcctgttcaacaacagtgaagtgaaaaacattttcgct
ggcgtagatgttcacttcgatagcaacgtggttgataaccatcagcaaaagcaattcgtc
agtgtacgtgcgacagaagagttaccgctggtcaatcctacctacaacaacgaggtgtac
gttggcacggtgactaacgcagagcaaatcgcttcttactcagtagaactgccgaagagc
gagcaagcaaaaggctttacccaataccaaggcgttggtgcggatacgagcaagctgtct
gtagtaacggcagaaacagctggtcctgattacctccttgcaaatacccaaaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (42)   

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