KEGG   Virgibacillus sp. 6R: BKP57_02665
Entry
BKP57_02665       CDS       T04596                                 
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
vig  Virgibacillus sp. 6R
Pathway
vig00730  Thiamine metabolism
vig01100  Metabolic pathways
vig01240  Biosynthesis of cofactors
vig04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:vig00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    BKP57_02665
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    BKP57_02665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vig03016]
    BKP57_02665
Enzymes [BR:vig01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     BKP57_02665
Transfer RNA biogenesis [BR:vig03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    BKP57_02665
SSDB
Motif
Pfam: ThiI THUMP QueC ATP_bind_3 NAD_synthase tRNA_Me_trans IZUMO ABC_membrane
Other DBs
NCBI-ProteinID: API90851
Position
complement(557897..559093)
AA seq 398 aa
MQYDYILIRYGEMALKGKNIKAFILRLQENIQNKLQDYKNVKVKRTQGRMFILLNGHDPE
PIIDKCKHIFGIQSLSLAIKEENDPDKVKEAALYALKKNDAASTFKVTVKRINKDFPIRS
QEFNHVVGKHLLTNTNGITVDVHQPDVEIKIEIRNEATYITSSVVQGAGGLPVGTSGKSL
LLLSGGIDSPVAGYLAMKRGVQLEAIHFHSPPFTSERAKQKVLDLAKQLTQYGKSIQVHL
VPFTKLQQEIFRQIPDGYAMTIMRRIMMRISEKVCQEQGILSITTGENLGQVASQTMESM
NVINEVTNYPILRPLVAMDKTEIIDIAKKIGTYETSILPYEDCCTVFVPKSPKTKPKREK
ANHFEAKADLSEWVEEALQNIETIKITSRQENTYENLF
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgcaatacgattatatattaatacgttacggggagatggctttaaaaggtaaaaacata
aaagcatttatccttcgtttacaggaaaatattcaaaacaagttacaagattataaaaac
gtgaaggtgaaacggacgcaaggaagaatgttcattctattaaatgggcatgacccagaa
ccaatcatcgataaatgtaagcatatttttggaatacaaagtttaagcttggcgattaag
gaagaaaatgaccctgacaaagtgaaagaggctgcattatatgcgcttaagaaaaatgat
gctgcaagtacatttaaagttacagtaaaacgtattaacaaagatttcccgattcgttca
caggaatttaatcatgttgtaggcaagcatttgctaacgaatacaaatggtataaccgtt
gatgttcatcagccagatgtagagattaagatcgagattcgtaacgaggcaacgtatata
acttctagtgtcgttcaaggagctggaggcttgccagttggtacatctggtaaatcgtta
ttgttattgtctggtggtattgatagtcctgtagctggctatctggcgatgaagcgaggc
gttcaattggaagctattcacttccattctccgccatttacgagtgaacgagcgaaacaa
aaagtgcttgatttagctaaacaattgacacaatatgggaagtctattcaagttcatctt
gttccgtttacgaaattacaacaggaaattttccgccaaattccagatggttatgcgatg
acaattatgcgtcggataatgatgcgcataagtgaaaaagtgtgtcaggaacaagggatt
ttatctataactacgggagaaaatttaggacaagttgctagccaaacaatggaaagcatg
aacgtcattaatgaagtgactaactatcccattttgcggccacttgttgcaatggataag
accgaaatcattgatatagcaaagaaaattggcacatatgagacatccattctcccatat
gaagactgctgtacggtttttgtaccaaagtcaccgaaaacaaaaccgaaaagggagaaa
gcaaaccattttgaagcaaaagcagatttatcggaatgggtggaagaggcattgcaaaac
atagagacaattaagattacatctcggcaagaaaatacgtacgaaaatttgttttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

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