KEGG   Virgibacillus sp. 6R: BKP57_13570
Entry
BKP57_13570       CDS       T04596                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
vig  Virgibacillus sp. 6R
Pathway
vig03420  Nucleotide excision repair
vig03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BKP57_13570
   03430 Mismatch repair
    BKP57_13570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vig03400]
    BKP57_13570
Enzymes [BR:vig01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BKP57_13570
DNA repair and recombination proteins [BR:vig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BKP57_13570
   MMR (mismatch excision repair)
    Other MMR factors
     BKP57_13570
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 Viral_helicase1 UvrD_C_2 AAA_30 DEAD SLFN-g3_helicase NACHT Vmethyltransf
Other DBs
NCBI-ProteinID: API92744
Position
3001400..3003700
AA seq 766 aa
MTQMHQDFPYEQRRVDHIHEEIKQKELKIAAKTSHLKQDVIELRKTFWDDVTVNLDEPDD
VIETEASIKQQAELLTQKETIHGSLAKELRTLNRLKDNPYFGRIDFTEDGEEKESIYIGI
ASLMDSAEDNFLIYDWRAPISSLYYDYALGSASYQTLDGDVSGEISLKRQFIIRNGVIKA
MFDTGLTIGDQLLQEALGNNASTTMKSIVATIQKEQNKIIRNEKSKLLVVQGVAGSGKTS
AALQRIAYLMYRYRKQLNPENVMLFSPNPLFSSYIRNVLPELGEENVRQTTFYYFVEEKT
GEEFSIESPFTQMEYMLTNKGTTDGQIRMQGIAYKSSLAFKEVIDNYVACLYISGVCFKP
VVFRNQVIISNEAIANYFYSLDSSVSLFNRMELVANWLLKELALIQKREVSKDWVEEKIE
LLDKEAYAKAYYKAQKQAAGSVVDEEMILRKAVVSKMFARIKKRIKQYAFVDVPKTFAQL
FKHQEQQKDLPTEWNDIAAQTIKNIQSNILGWEDAAPYAYFKGKLLGDMADRSVRYLVID
EAQDFSAFQFAYIKELFPHTRMTLLGDVNQAIYNPISKQNPLLLDEKNDVERITLTKSYR
PTKQLVQFTRHFAPGKDVIEPFEREGNKPKLVDVKEENQLVEVLINEVQELFQKGYETIA
LVTKSIQESKQLYKTLKGKIDCILVDEETYTFTKGILIIPVYLAKGIEFDAVVIPDATNK
HYTKEDQILFYTACTRAMHELSIMVTGEPTAFIKETPKNTYQMTEI
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgactcaaatgcaccaggattttccttatgaacaacgacgtgtagaccatattcacgag
gaaataaagcaaaaagagttaaaaatagcggctaaaacatcgcacttgaaacaagacgtc
attgaattgcgaaaaacgttttgggatgacgtgactgtaaatttggatgagcctgacgat
gtgattgaaacagaagcaagcattaaacagcaagcagagttattgacgcaaaaagaaacc
attcatggcagtttagcgaaagaattaaggacattaaatagacttaaagacaatccttat
tttggtcgaattgattttacagaagatggtgaagaaaaagagtctatttatattggcatt
gcttcgttaatggatagcgccgaagataattttcttatctatgattggagagccccaata
tcaagtctttactatgactatgcattaggcagtgcgagctatcaaacgttagatggagac
gtctctggagaaatatcgttgaagcgacaatttattattcgtaatggagtaataaaagca
atgtttgatacaggacttacaattggtgatcaattgctacaagaagctctaggtaataat
gcaagtacgacgatgaaaagtattgtcgcaacgattcaaaaagagcagaataaaatcatt
cgtaacgaaaagagcaaattattagtagtgcaaggggtagcgggtagtgggaaaacttct
gccgcattacaaaggatcgcttatttgatgtatcgttatcggaagcaattaaatccggaa
aatgtcatgctattttcgccaaatcctttattttcaagctatatccgtaatgtgttacct
gaacttggtgaggagaatgtaagacaaactactttttactactttgtggaagaaaaaaca
ggagaagaattttcaattgaatccccttttacacaaatggagtatatgctgacaaataaa
ggaacaacagatggtcaaattcgtatgcaagggattgcctataaatcttcgctcgcattt
aaggaagtgatcgataattatgttgcttgtttatatatttccggggtttgttttaaacct
gttgtgtttcgcaaccaagttattatttcgaacgaggcaatcgctaattatttttactcg
ttggattcttccgtttctttattcaatcggatggaactagtcgcaaactggctgttgaag
gaactagctttgattcaaaagcgggaagtttcgaaggattgggtagaagaaaaaatagaa
ttgttggataaagaagcctatgcgaaggcgtattataaggcacaaaagcaagctgctgga
agcgtagtggacgaagagatgattttaagaaaagccgttgtgagtaaaatgtttgctcgt
atcaagaagcgaataaaacagtatgcgtttgtcgatgttccaaaaacatttgcacaattg
tttaagcatcaggaacaacaaaaggatctgccaacggaatggaatgatattgctgcacaa
acgataaaaaatattcagtccaatatcttggggtgggaagacgcagcgccatatgcgtac
tttaaaggcaaactgcttggagatatggcggatcgttccgtgcgctatttagtaatagat
gaggcacaggatttttccgcttttcaatttgcctatattaaggagttgtttccacatacg
agaatgacgctattaggggatgtgaatcaagctatttataatcccatatctaaacaaaat
ccattacttttagatgaaaaaaatgatgtggagcgaattacattaacgaaaagctatcgt
cctacgaaacagcttgtccaatttacaaggcatttcgcccctggtaaagatgttattgag
ccgtttgaacgagaaggaaacaaaccaaagcttgttgatgtaaaagaagaaaatcagctt
gtagaagtgctaattaatgaggtacaagaactgtttcaaaaaggatatgaaacgatagcg
ctcgttacgaaatcgatacaggaaagtaaacaattatataagacattaaaaggaaagata
gattgtatattagttgatgaagagacatacacgtttacaaaagggattttaatcattccg
gtgtatttagcaaaaggcattgaatttgatgcggtagttattccagatgcaacaaacaag
cattatacaaaggaagatcaaatcttattttatacagcttgtacgcgagcaatgcatgaa
ttatcgataatggttacaggtgagccaaccgcctttataaaggaaacgcctaaaaacacg
tatcaaatgaccgagatttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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