KEGG   Viridibacillus sp. JNUCC-6: JNUCC6_12415
Entry
JNUCC6_12415      CDS       T06874                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
vij  Viridibacillus sp. JNUCC-6
Pathway
vij02020  Two-component system
vij02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:vij00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JNUCC6_12415 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    JNUCC6_12415 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vij03021]
    JNUCC6_12415 (rpoN)
Transcription machinery [BR:vij03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     JNUCC6_12415 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID Sigma70_r4 HTH_IclR
Other DBs
NCBI-ProteinID: QOV09467
UniProt: A0A7M2QPJ8
Position
2521311..2522603
AA seq 430 aa
MELVIQQRQELKMLMTVQLRQSIELLQYSNDDLEQFIRQQELENPLIELQEKADDQYVEK
LPMYTFSNHSRKETTDITYKAEIDFRDYLYKLVKLNFNDDYIQKQLKYIIYNLNDQGYFQ
TDHIHTTSETKEITEGIQLLQQIGPSGIGARTLEECLTLQARDRYPEHQQLTILINEHLS
LLADKKWQVIANKMHISLSEIKECNDLIKTLNPKPCAVMSYETTEYLRPDIIVEEHNHQL
LFHLNDTYLPNIHLNSFYMNLPTANRDEKKYINEHYKNYNWLINSIEQRRKTIIKIMQVL
LEKQQEFFLKGFSALQPLTLKEVAEAIEMHESTVSRATTNKFVQTPIGTFELKNLFTSKL
ETKDGHTISQEKVKTLLQELIAEENKIKPYSDQKMAEYFNSEYGITISRRTINKYREEMR
IPSASKRKEL
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggaacttgtaattcaacaacgccaggaattgaaaatgttaatgacagttcaacttaga
cagtcaatcgagttacttcaatactctaatgatgatttagaacaatttatccggcaacaa
gaattagagaaccctttaattgaacttcaagaaaaagcagatgatcaatacgtcgagaag
ttacctatgtacactttttcgaatcactcaagaaaagaaactacagatattacatataaa
gctgaaattgattttagagattatttatataaattagtaaaacttaatttcaatgatgac
tacatacaaaaacagttaaagtacattatttataatttaaatgatcaaggatacttccaa
acggatcacatacataccacttctgaaacaaaagaaattactgaaggaatacaactatta
caacaaatcggtccttctggtattggtgcccgtacattagaagaatgtctaacattacaa
gctcgtgatcgatatcctgaacatcaacaactaactatacttattaatgaacatttaagt
ttattggcagataaaaaatggcaagttatcgccaataaaatgcatatttcactctcagaa
ataaaagaatgcaatgatttgattaaaaccttgaacccgaaaccctgcgctgttatgagt
tatgaaacaacggaatatttgcgtccagatattattgtggaagaacataatcatcaacta
ctattccatttaaatgatacttacttgccaaatatccatttaaatagtttttatatgaac
ttaccaactgcgaatcgtgatgaaaaaaaatatattaatgagcattataaaaactataat
tggctcattaacagcattgaacaacgtcgtaaaacaattattaaaatcatgcaggtactt
ttagaaaagcagcaggaattttttcttaaaggtttttctgctttacaaccacttacttta
aaagaagtagcagaagctatagaaatgcatgaatctaccgtaagtcgagcaacaaccaat
aaatttgttcaaacaccaattggtacatttgaacttaaaaacttatttacatctaaactc
gaaacaaaagatggccatacgatttcacaagaaaaagtaaagactcttttgcaagagctc
attgctgaagaaaataaaataaaaccctattcagatcaaaaaatggcggaatatttcaac
tccgaatatggcatcacaatctctaggagaacaatcaataaataccgtgaagaaatgaga
attccctctgctagtaagcgtaaggagctttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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