KEGG   Viridibacillus sp. JNUCC-6: JNUCC6_19685
Entry
JNUCC6_19685      CDS       T06874                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
vij  Viridibacillus sp. JNUCC-6
Pathway
vij03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vij00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    JNUCC6_19685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vij03021]
    JNUCC6_19685
   03400 DNA repair and recombination proteins [BR:vij03400]
    JNUCC6_19685
Enzymes [BR:vij01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     JNUCC6_19685
Transcription machinery [BR:vij03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     JNUCC6_19685
DNA repair and recombination proteins [BR:vij03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      JNUCC6_19685
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: QOV10765
UniProt: A0A7M2QRY7
Position
4022906..4023130
AA seq 74 aa
MLYPSVDVLKQKIDSKYSLVSLASKRARAMQEGSDYRLSSYKSHKNVGKALEEVSAGVLS
QVAQDESAIYEDEV
NT seq 225 nt   +upstreamnt  +downstreamnt
atgttatacccatctgttgacgtattaaaacaaaaaatcgattcaaaatattcattagtt
agccttgcttcaaaaagagcacgtgcaatgcaagaaggtagtgactatagactttcatct
tataaatcacataagaatgtaggtaaagcactagaagaagtttctgctggcgttttaagt
caagtagctcaagacgaatcagctatttacgaagacgaagtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system