KEGG T04951: CFK37

Virgibacillus phasianinus: CFK37_14320

Entry

CFK37_14320       CDS       T04951

Name

(GenBank) exodeoxyribonuclease VII large subunit

K03601

exodeoxyribonuclease VII large subunit [EC:3.1.11.6]

Organism

vil Virgibacillus phasianinus

Pathway

vil03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:vil00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CFK37_14320
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vil03400]
    CFK37_14320
Enzymes [BR:vil01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     CFK37_14320
DNA repair and recombination proteins [BR:vil03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CFK37_14320

SSDB

Motif

Pfam:

Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon ABC_sub_bind RecJ_OB DUF4085

Other DBs

NCBI-ProteinID:

ASK63240

UniProt:

A0A220U573

Position

2971668..2973020

AA seq 450 aa
MTVQYLTVTALTKYIKRKFDTDPHLHQVFVRGEISNFKLHSRGHMYLTIKDNQTRIQAVM
FAGNNRSLKFTPENGMKVLITGDIGVFEPYGQYQLYIQHMEPDGIGALYLAFEQLKDKLL
KQGYFEQDHKKEIPPYPEHIGIVTSPTGAAIRDIITTIKRRYPTVGLTVIPALVQGVNAA
GSIVRGIELANSLPDLDLLIVGRGGGSIEELWGFNEEIVAQAIYDSRIPIISAVGHETDT
TISDYVSDLRAPTPTGAAELAVPSQIELKDKLLQIKRSLTTFMNNQLYSSSKQLGHLNQS
YAFRYPKQLVIQKEQELDKLVERLNKAVQFTVKKKDDELSSNKKRLLSNHPEQQIQTMSK
QIYQLQKELQNRMSLICDQKATQIGSIIDKLSLLNPLEIMKRGYAIPYDQNGNIIKSGEQ
ASKNELIQVKLLNEILACRIEEIRKDEADE

NT seq 1353 nt +upstreamnt +downstreamnt
gtgactgtacaatatcttactgtaacagcacttacgaagtatattaaacgaaagtttgat
accgacccgcatttacatcaagtgtttgttagaggggaaatttctaattttaaactccat
agcaggggacatatgtacctgacaataaaggataatcaaacgagaatacaagcagtaatg
tttgcaggtaataatcgatcattaaagtttaccccggaaaatggcatgaaggttttaatt
actggtgatattggagtatttgaaccttatggacagtaccaactatacatacaacatatg
gaacctgatggcattggggcgctttatcttgcctttgagcaattaaaagataaattgtta
aagcaaggttattttgaacaggaccacaaaaaagagatacctccctatcctgaacatatc
ggaattgtcacgtcgccgactggtgcagcaatcagagatataattacgaccattaaacgc
agatatccaactgttggtctaacagtaatccccgctcttgtgcagggagtaaatgctgct
ggttcaatcgtaaggggtattgaattagcaaacagccttccagatctcgatctgttaatt
gtcggtagaggcgggggatctatagaggaattgtggggttttaatgaagagatagtggca
caggcaatatatgattcaagaatacctattatttccgcagttggccatgaaactgataca
acaatcagtgactatgtttctgatttacgagcccccacccctacaggtgctgctgaatta
gcagtgccctcgcagatagagttaaaggataaattgctccaaatcaaacgttctttaaca
acattcatgaacaatcagctctattcgtcatcaaaacaacttggacatttgaatcagtcc
tatgcatttcgttatcctaaacaactagtcattcaaaaggaacaggaactggacaagttg
gtagagcgattaaacaaagcggtgcaatttactgttaagaagaaagatgatgaattaagt
agcaacaagaaacgattattaagcaatcatccagagcagcaaatccaaacaatgagtaaa
caaatataccagttgcaaaaagagctgcaaaaccggatgtcgctcatatgtgatcaaaag
gcaactcagatcggttccataattgataaactttcgctattaaatccattggaaatcatg
aaacgtggatacgcaataccttatgaccaaaatgggaatatcattaagtctggagaacag
gcgagtaaaaatgaactcatacaggtaaagttacttaacgaaatattggcatgtcgaata
gaagaaatacggaaggatgaggcagatgagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF

DBGET integrated database retrieval system