KEGG   Vulgatibacter incomptus: AKJ08_2047
Entry
AKJ08_2047        CDS       T04035                                 
Name
(GenBank) Uracil-DNA glycosylase, family 4
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
vin  Vulgatibacter incomptus
Pathway
vin03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AKJ08_2047
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vin03400]
    AKJ08_2047
Enzymes [BR:vin01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     AKJ08_2047
DNA repair and recombination proteins [BR:vin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AKJ08_2047
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AKU91660
UniProt: A0A0K1PDR3
Position
complement(2421470..2422189)
AA seq 239 aa
MDDRSHSRDELAAVAAELARHLRWARREGVETLPIVEAAPLAPALEAPRVPPDLDGIRAD
LGDCRRCGLCEGRTRIVFGDGAPSAELVFVGDRPGADEDERGLPAVGPAGELLEKMIGAM
GFARHEVYLTDTVKCRPPGDRAPTPDEVATCRPYLRGQLAAIRPKAIVALGQAASQALLG
GDAPISNLRGQWQELEGVPVMPTFHPAYLLRNPGEKAKVWNDLKLVLAALGRDVPERAR
NT seq 720 nt   +upstreamnt  +downstreamnt
atggacgatcgttcgcacagccgagatgagctggcagccgtggcggcggagctcgcgcgc
cacctgcgttgggcccgtcgggaaggcgtcgagaccctcccgatcgtggaggcggccccg
ctcgcgcccgccctcgaggccccaagggtgccgcccgacctggacgggatccgcgccgac
ctcggcgactgcaggcgctgcgggctctgcgaggggaggacgcggatcgtcttcggggac
ggcgccccgtccgccgagctcgtcttcgtgggcgatcggcccggcgcggacgaggacgag
agaggcctcccggccgtggggccggcaggcgagctcctcgagaagatgatcggggccatg
ggcttcgcccggcacgaggtctacctcaccgacaccgtgaagtgccgcccgccaggggat
cgtgcgccgacgccggacgaggtcgcgacctgccggccctacttgcggggccagcttgcg
gcgatccggcccaaggccatcgtcgcgctgggccaggccgcctcccaggcgctcctgggc
ggcgacgcgccgatctccaacctccgggggcagtggcaggagctcgagggcgtccctgtg
atgcccacctttcacccggcgtatctgctgcgcaacccgggcgagaaggcgaaggtctgg
aacgacctcaagctcgtgctcgccgccctcgggagggacgtgccagagcgagcgaggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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