KEGG   Virgibacillus sp. SK37: X953_00005
Entry
X953_00005        CDS       T03219                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
vir  Virgibacillus sp. SK37
Pathway
vir03030  DNA replication
vir03430  Mismatch repair
vir03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    X953_00005
   03430 Mismatch repair
    X953_00005
   03440 Homologous recombination
    X953_00005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vir03032]
    X953_00005
   03400 DNA repair and recombination proteins [BR:vir03400]
    X953_00005
Enzymes [BR:vir01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     X953_00005
DNA replication proteins [BR:vir03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     X953_00005
DNA repair and recombination proteins [BR:vir03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     X953_00005
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AIF41929
UniProt: A0A075JJ14
Position
1565..2701
AA seq 378 aa
MKFIIQRDQLIASIQDVMKAISSRTVVPILTGMKIEVKQHGITLTGSDSDISIESYIPAE
EDGNVNVEQIEEGSIVLQAKYFPDIVRKLPEKTVEIEADENLKVTIRSGKAEFNLNGQDA
EEYPQLPKLQTDDSFELPTDLLKSLIKQTVFAVSTMETRPILTGVHIKLEEGNLTFTATD
SHRLASREVPVSDSNTAFPSVVVPGKSLNELNKILDDTEEPVEISVTNNQILFRAKNLNF
LSRLLDGNYPETSRLIPEQSKTVLYAKTKELLNTIDRASLLAKEERNNVVRLNTQGDKVI
NITGNSPEVGTVSEEIVVQSMEGEELKISFSSKYMIDALKAIEYEEVKVEFTGAMRPFII
RPANEDPILQLILPVRTF
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgaaatttattattcaacgtgatcaattaattgcaagcatacaggatgtaatgaaagca
atatcttctagaacagttgtaccgatattaactggtatgaaaattgaagtgaaacaacat
ggaattactctcacaggaagtgattctgatatatccattgaatcttatataccagctgag
gaagatggtaatgtaaatgtagagcaaattgaagaaggtagtattgtattacaagcaaaa
tattttcctgatattgttcgtaaattaccagaaaaaacagttgagatcgaggctgatgaa
aatttaaaggttaccattcgctcaggtaaagctgaatttaatcttaatggacaagatgca
gaggaatatcctcaactacctaagttacaaacagatgatagttttgaattaccaacagat
ttacttaaaagtttaataaagcaaacggtattcgctgtttcaacaatggaaacacgccca
attttaacaggggttcatattaaactggaagaaggtaacttaacatttactgctacagac
agtcaccgtcttgcttcccgcgaagtgccagtaagtgattctaacacagcattcccttct
gtcgttgttcctggtaaaagtctaaatgaattaaacaaaattctcgatgatacagaagaa
ccagtagaaattagtgttacaaataatcaaattctcttccgtgcaaagaaccttaatttt
ctatcccgtttattggatggaaactatccggaaacttctcgtctgattccagagcaaagt
aaaacagtattgtatgcaaaaacaaaagaattgctaaacacgattgatcgtgcgtcactt
ttagctaaagaagagcgaaataatgttgttcgtttaaatacccaaggcgataaagttatt
aatattacagggaattctccagaggtaggtaccgtttcagaagaaatcgttgtacaatcc
atggaaggcgaagaattaaaaatttctttcagctctaaatatatgattgatgcactgaaa
gcaattgaatatgaagaagttaaagtagagtttacaggagctatgcgcccattcattatt
cgtccagcaaatgaagatccaattttacaactcatcttaccagtacggacgttttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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