KEGG   Virgibacillus sp. SK37: X953_19330
Entry
X953_19330        CDS       T03219                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vir  Virgibacillus sp. SK37
Brite
KEGG Orthology (KO) [BR:vir00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vir02048]
    X953_19330
Enzymes [BR:vir01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     X953_19330
Prokaryotic defense system [BR:vir02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   X953_19330
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C ResIII DEAD Helicase_C CetZ_C
Other DBs
NCBI-ProteinID: AIF44979
UniProt: A0A075JT04
Position
complement(3731990..3734935)
AA seq 981 aa
MSEAQAWNEETLVENRMIDQLQKLGYTYVHGTELDKERTSQTEVVLKGRLQAAIQRLNPW
INENNLNKVVRSLTHMEATSLMEANQHFHELLINQLSVQQDVGSGRKNQTVKLIDFDNIE
KNGFIITNQFSYTHANETIRPDIMLYVNGLPLVVIECKSPALPPDEQIGHGVKQLRRYQQ
ENEALFHYNQFVIATSNDRAKVGTIGAKAQHYSAWKEPYPLSVQGIGENATAQDILTTGL
LDKKRLFDIILNFIVYEPEDGRVIKKMARYQQYRAVNKAVERILIGEHPQARGGVVWATQ
GSGKSLSMVFLSMKLRRLKQLENPVIVVVTDRQDLDTQITATFKRCGFPNPKQAESVEEL
QKLLQQGPGSTVMTLVQKFQTEEDEEYPLLTDSDNVIVLVDESHRSQYSSLAMNMRIGLP
NATYIGFTGTPIDKEDKSTVRTFGTYIDKYPIEKAVQDGATVPIFYEARLVDLHVQGETI
DTLFDRFFRDYSDEDKERIKQTYVTEEALTASPKRLKTVVLDMIEHYEQHIQPNGFKAQI
VSVSRQAAVAYKKLMDELSDYESAVIISSGHNDSEEMKQYGISRAEEKELIQRFKKPLDE
DPLAFLIVCDKLLTGFDAPIEQVMYLDKPLKEHNLLQAIARTNRTYDKKTHGLIVDYYGV
SQFLEEALGIFHEEDIKGAMHHVDEELPRLQSRHRRVMQFFDYINKSDLEACLKVLEPED
VRNKFDTAFKKFSESMDMVMPSPKAKAYVDDLKWLGKVRKLAKSRYYVDDGTMDISDCGG
KVRELIEEYVYASTPEILFEPVNILTNKFDEKLDELKTPEAKAAEMEHAIKYEIRIKLDE
NPVKYTSLRERLEQLIEQRKARQLTIDELLEEYHAMREEMMDMEQESQSFGLKDAKQLPF
YQLLEQQIPVEMEQESLRDLTEIITEIIQDNAVIDWIEKEDVKREMRKKLKKQLRASLVP
NKQVEQVARQLMELGEVHYKS
NT seq 2946 nt   +upstreamnt  +downstreamnt
atgagtgaagcgcaagcttggaatgaagaaacgttagtggaaaatcgaatgattgaccaa
cttcagaagcttggctacacgtatgttcatggaacggaactagataaagaacggacttct
caaacagaagttgtcttaaaaggtcgccttcaagcagccattcagcgcttgaatccatgg
attaatgaaaataacttaaacaaagtcgttcgtagccttacccatatggaagcgacgagc
ctcatggaagcaaatcaacattttcatgaattattaatcaaccaactatcggttcaacaa
gatgttggtagtggacgaaaaaaccagactgtgaagctgattgattttgacaatattgag
aaaaatggttttattattaccaatcaattcagttacacccatgcgaatgaaacgattcgt
ccagatatcatgctttatgtgaatggactgccattagtcgtaatcgagtgtaagagccca
gctttaccacccgatgaacaaatcggacatggagtcaagcaattacgtcgctaccaacaa
gaaaacgaagcactttttcattataatcagtttgttattgctacgagtaatgaccgtgca
aaagtgggaacgattggcgctaaagcacaacattatagtgcttggaaagaaccttatcct
ttatctgttcagggcataggcgagaacgcaacagctcaagatattttaacaacaggatta
ttagataaaaagagacttttcgatatcattttaaactttattgtttatgaaccagaagat
ggacgagtaatcaaaaaaatggctcgttaccagcagtatagggctgtgaataaggcagta
gaacgaatcctaatcggtgaacacccgcaagctcgtggtggtgttgtctgggcgacacaa
gggtcaggtaaatcattatccatggtctttttatcaatgaagttacgacgtttaaaacag
ctagaaaaccctgtaatagtcgttgtcacggatagacaagacttagatacgcaaataact
gcaacttttaaacggtgtggattcccgaacccgaaacaagcggagtctgtagaagaactc
caaaagttattacaacaaggtccaggttctacggtgatgaccttagtacagaaattccaa
actgaagaagatgaagagtatccattactaacagattcagataatgtcattgtgttagtt
gatgagtcacaccgttcccagtatagttcgctagcgatgaatatgcgcattggtttgcca
aacgcaacttatatcggatttacaggtacaccaattgataaagaagataaaagtaccgtt
cgaacgtttgggacgtacattgataagtaccctatagaaaaagcggtacaagatggagct
accgttcctattttttacgaagctagattggtggatttacatgtccaaggggaaacgatt
gatacattatttgaccgtttctttcgtgattattcggatgaagataaagaacggattaaa
caaacatatgtgacagaagaagcattaaccgcatcacctaaaagacttaaaaccgttgtc
cttgatatgatagagcattatgagcaacatattcagccaaacggatttaaagcccaaatt
gtttccgtatctcgtcaagcagctgttgcttataaaaaattaatggatgaactcagtgat
tatgaatcagcagttatcatttcaagtggtcataacgattcagaggaaatgaaacaatat
ggcatatcacgagcggaggaaaaagaacttatccaacgctttaagaaaccattagatgaa
gacccattagcctttttaattgtatgcgataaattgttaacagggtttgatgcaccgatt
gaacaagtgatgtacttagacaaacctttaaaggaacataacttgcttcaagctattgct
agaacgaaccgaacgtatgataaaaagacacacggattaattgttgattattatggtgta
tcgcaatttttagaagaagcattgggaattttccatgaagaagatattaaaggggccatg
catcatgtagatgaagaattaccacgattacaatctcgtcatcgccgagtcatgcaattc
tttgattatattaataagagtgaccttgaagcttgtttgaaggtgctggaaccagaagat
gttcgtaataagtttgatacagcctttaagaagttttcggaaagcatggatatggtgatg
cctagtccgaaagcgaaagcctatgtagatgatttgaaatggctaggaaaagttagaaaa
ctagcaaagtctcgttactatgtcgatgatggcacgatggatatatccgattgtggtgga
aaggtacgtgaacttattgaggagtatgtttatgcatcaacaccagagattctttttgag
ccagtaaacatactaaccaataaatttgatgagaagctagatgaattgaaaacaccagaa
gcaaaagcagctgaaatggaacatgccattaagtatgaaatacgaatcaaactagatgag
aatccagtcaaatacacatcattaagagaacgattagagcaactaatcgaacaacgaaag
gcacgtcaattaacaattgacgaactattggaagaataccatgctatgcgagaagaaatg
atggacatggaacaagaaagtcagtcgtttgggctaaaggatgccaagcagttaccgttt
tatcagttactagaacaacaaattccagttgaaatggaacaagaaagtttaagagattta
actgaaattattacggagattattcaagacaatgcagtgatagattggatagaaaaagaa
gatgtaaaacgtgaaatgcgaaagaaattgaaaaaacaacttagagcaagcttagttcct
aataagcaggttgaacaagtcgccaggcaattgatggaacttggagaagttcattataag
tcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system