KEGG   Vibrio mimicus: AL543_03115
Entry
AL543_03115       CDS       T04381                                 
Name
(GenBank) sensor domain-containing phosphodiesterase
  KO
K20962  c-di-GMP phosphodiesterase [EC:3.1.4.52]
Organism
vmi  Vibrio mimicus
Pathway
vmi05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vmi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    AL543_03115
Enzymes [BR:vmi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     AL543_03115
SSDB
Motif
Pfam: EAL GGDEF GAF GAF_2 Filament
Other DBs
NCBI-ProteinID: AMG02032
Position
1:complement(705565..707463)
AA seq 632 aa
MAPILPQSTPIPSTMLASWQNMLNLLAEILKVPATMIMRLHHHEFDVYCTNTSSENPYRI
GMTEQLGKGLYCETVVNTRQILIVTNAETDPLWKDNPSMEFGMRAYCGIPLQWPNGDLFG
TLCATDRREHHFHATDQQLIRAFRESIEAQLKTLYQRETLLQMNQDLHFKVRNKMQSIAS
LNQSLHQEIDKRRAAEQQIEYQRSHDVGTGFLNRSALEHQLDELLTQLGDTCELAVLHIG
FANVRQLQARLGYHLWDDVLKQLRERIGPIIDAELITARPTSTNLTLVLKSTQLDAHLNL
LCHKLIHVGQAQFQIEGVTVHLNPYIGVALSRETHDPQQLLSHAVSSMIACKDSGYKVFF
HSPAIADDHARQNQLENYLLHAVRNNDLMLYFQPKVSVKTQHWVGAEALLRWKHPVLGEF
SNETLIHMAEQNGLIFEVGHFVLHQALKAASDWLSICPTFRIAINVSSVQLKNSRFVEQI
HDLLTFYHFPAHQLELEITESGLIVDEPTAIDILNRLHGLGVTLSLDDFGTGYASFQYLK
KFPFDGIKIDKSFLEQIEHSENDQEIVRSMLHVAKKLKLKVVAEGIETKQQEQFILEHGC
DIGQGFLYGRPMPSDAFEQKLKQHAQGLPAQE
NT seq 1899 nt   +upstreamnt  +downstreamnt
atggcaccaatccttccacaatcaaccccgataccttcgactatgctggcaagttggcaa
aatatgctcaacttacttgcagagatcctcaaggttcctgccactatgatcatgcggttg
catcatcacgagtttgatgtgtactgcacaaacacgagcagcgagaatccctatcgaatt
ggtatgaccgagcaactcggtaaagggctgtattgtgaaaccgtggtcaatacccgacag
attttgatcgtcaccaacgccgaaactgatcctctgtggaaagacaatccgagtatggaa
ttcgggatgcgcgcttactgtggcattcccctgcaatggcccaatggtgacttgttcggg
acactctgcgcaactgatcgtcgagaacaccatttccatgccacagaccaacagttaatc
cgcgcttttcgcgaatcgattgaagcacaacttaaaacactctatcaacgcgaaaccttg
ctgcaaatgaaccaagatttgcacttcaaagttcgcaacaaaatgcaaagtattgcctct
cttaaccaatctcttcatcaagaaatcgacaagcgtcgcgctgctgaacagcaaattgaa
taccaacgcagtcacgatgtaggcacgggttttcttaaccgcagcgcgctagaacatcaa
ctggacgaactcttaactcagttgggtgacacctgtgagctggcagtacttcatattggt
tttgcgaatgtgcgccagctacaggctcgactgggttatcacctgtgggatgacgtatta
aaacaactgcgtgaacgaattggtccgattatcgatgccgagctgatcaccgcgcgccca
acatccaccaaccttactttagttctgaaaagcacccagcttgacgcccatctcaacctg
ctttgtcacaaacttatccatgtagggcaagctcagtttcaaatcgagggagtgacggtt
catctcaacccatatattggtgtggcgctctcgcgcgaaactcacgaccctcagcagctt
ttgagccatgcggttagcagcatgattgcctgcaaggattccggctataaagtttttttc
cactcacccgccattgcggatgaccacgcacggcaaaatcagttggaaaactatctgttg
catgccgtgcgcaataacgacttgatgctctacttccaaccgaaagtgagtgttaaaaca
caacattgggttggtgctgaagcgttactgcgttggaagcacccggtgttaggtgagttt
tctaacgaaactttaatccacatggcagagcagaatgggttgatctttgaagtgggccat
tttgtattacatcaagcactcaaagccgccagcgattggctgagtatttgccccactttt
cgtattgcgattaacgtttcctcggtgcagctaaaaaatagccgttttgttgaacagatc
catgatctgctgacgttttaccacttccctgcccaccagttagaactggagatcaccgaa
agcggtttgattgtggacgaaccaactgcgattgatatcctcaatcggctgcacggacta
ggtgtgacactatcactggatgattttggtactggctacgcatcatttcagtacctgaaa
aaattcccttttgatggcattaagattgataaaagctttttggaacaaattgaacacagc
gagaatgatcaagagatcgtacgctctatgctgcatgttgcaaaaaagcttaagctcaag
gtcgtagcagaagggattgaaaccaagcaacaagagcagttcattctggaacatggctgc
gatattggccaaggctttctctatggccggcctatgcccagtgacgcatttgaacaaaag
ctaaaacagcatgcccaaggattaccagcgcaagaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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