KEGG   Vibrio mimicus: AL543_08810
Entry
AL543_08810       CDS       T04381                                 
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
  KO
K08316  16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
Organism
vmi  Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:vmi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vmi03009]
    AL543_08810 (rsmD)
Enzymes [BR:vmi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.171  16S rRNA (guanine966-N2)-methyltransferase
     AL543_08810 (rsmD)
Ribosome biogenesis [BR:vmi03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    AL543_08810 (rsmD)
SSDB
Motif
Pfam: Cons_hypoth95 MTS Methyltransf_31 Methyltransf_25 MethyltransfD12 Met_10 TRM Methyltransf_15 RrnaAD SAM_MT Methyltransf_12 RsmJ Methyltr_RsmB-F Methyltransf_4 Methyltrans_SAM FtsJ GidB N6-adenineMlase Spermine_synth DNA_methylase Methyltransf_11 Ubie_methyltran
Other DBs
NCBI-ProteinID: AMG03138
Position
2:584817..585416
AA seq 199 aa
MQRRRQPNPSQKKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPQ
SRCLDLFAGSGGLGFECASRQASQVTMLELNPLAFNQLKTNVQSLKAENIELIHTDALAF
LRQSGKPYDVVFIDPPFRQGLLQETTQLLEQNGWLSSQAMIYIECEKELPLTELPSHWHL
HREKSAGQVCYRLFIREEQ
NT seq 600 nt   +upstreamnt  +downstreamnt
atgcaaagacgtcgccagccaaacccatcacaaaaaaaggcccctactgggcaagttcgg
attattagcggtctgtggcgcggccgaaaactgcccgttcatgatgccgaagggttgcgc
ccaacgaccgatagagtcaaagaaactctattcaactggttagctcaagaagtaccgcag
tcacgctgtctcgatctctttgctggttcgggcgggttaggctttgaatgtgcttcacgc
caagcaagtcaagtgactatgctggagctgaaccctctcgcgtttaatcaattgaaaacg
aatgtacagagcctcaaagcggaaaatattgagcttattcacacggatgcactcgccttt
ctgcgacaatcaggcaaaccttatgacgtggtgtttattgatccaccttttcgacaaggt
ttgttacaggaaaccactcagttactcgagcaaaacggttggctctcgtcacaagcgatg
atttatattgagtgcgaaaaagagctgccactgactgaattaccctctcattggcatctg
catcgagaaaagagtgccggacaagtctgttatcggctgtttataagggaagaacaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (35)   

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