KEGG   Vibrio mimicus: AL543_12445
Entry
AL543_12445       CDS       T04381                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
vmi  Vibrio mimicus
Pathway
vmi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:vmi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AL543_12445 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vmi01007]
    AL543_12445 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vmi03016]
    AL543_12445 (lysS)
Enzymes [BR:vmi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     AL543_12445 (lysS)
Amino acid related enzymes [BR:vmi01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   AL543_12445 (lysS)
Transfer RNA biogenesis [BR:vmi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    AL543_12445 (lysS)
 Prokaryotic type
   Other AARSs
    AL543_12445 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AMG03752
Position
2:1328958..1330490
AA seq 510 aa
MTDAVQNEINQEQIAQEENKLIAERRSKLDHIRKDCKANGHPNSFRRDSLAGDLQKEFGE
KSKEELEALNHVVSIAGRVMAKRGPFLVIQETSGRIQAYASKEVQQELKDKYQGLDIGDI
IGVQGALHKSGKGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSR
NAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPE
LYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSV
ALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIA
KSVHVDVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFE
FFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQ
GIGIDRLVMLLTNTHTIRDVILFPAMRPQQ
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgactgatgctgttcaaaacgagattaatcaagagcaaatcgcgcaagaagaaaacaaa
ctgattgcagagcgtcgcagcaagttggatcacatccgtaaggactgtaaagcaaacgga
cacccaaactcgttccgtcgcgacagcctagcaggtgatctgcagaaggagttcggtgaa
aagagtaaggaagagctggaagcattgaatcatgttgtgtctatcgccggtcgtgtgatg
gcaaaacgtggtccattcctggttattcaggaaacttctggccgcattcaggcttatgca
tctaaagaagttcaacaagagctgaaagacaaataccaaggtctagatatcggtgacatc
atcggtgttcaaggtgcgctgcacaaatcaggcaaaggtgacctgtacgtcaacatggaa
caattccaactgttgactaaagcactgcgaccactgccagagaagttccacggtctgact
gaccaagaaatgcgttaccgccagcgttacgttgacctgatcgtcaacgaaaattctcgc
aacgctttcgttgtacgttctaaggtgatgtcagcaattcgtaacttcatgatctcaaaa
cagttcatggaagtggaaacgccaatgatgcacgtgatccctggcggtgcgagtgcgcgt
ccattcatcacgcaccacaacgctctcgacatgcccatgtacctgcgtatcgcacctgaa
ctgtacctgaagcgtcttgttgtgggtggttttgatcgtgtattcgaaatcaaccgtaac
ttccgtaacgaaggcctttcgccacgccacaacccagaattcaccatgatggaattctat
atggcgtacgcagactacaaagatctgatggacttgacggaagaactgctcagctcagtg
gcgttagaagtgcttggttcaacctcaatgccttacggtgagcataccgttgagtttggt
ggcaaatacgcgcgcatgagcatgttcgacgcgattaagcactacaatccaaatcacgcg
cagatccaagctctcaccgaagaagacatccaaaaccgcgacctaatggtttctatcgcg
aaatccgttcacgttgatgttgaacctttctggacatgtggtcagcttcttgaagagatc
tttggtgaaacggctgagcctaaactgatgcagccaaccttcatcacaggctacccagcg
gatatctctccactggcgcgtcgtagtgatgataacccgttcttcactgatcgctttgag
ttcttcattggtggtcgtgaagtggcaaacggcttctcagaacttaacgatgctgaagac
caagacgcgcgcttcaaagctcaagtggaagcgaaagagtccggtgatgatgaagcgatg
ttctacgatgccgactacattaccgctttggaacacggcttaccgccaacagcaggtcaa
ggtattggtattgatcgtctggttatgctactgaccaatacacacaccatccgtgatgtg
atcttgttcccagcgatgcgccctcagcaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system