KEGG   Vibrio natriegens: PN96_21590
Entry
PN96_21590        CDS       T04636                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
vna  Vibrio natriegens
Brite
KEGG Orthology (KO) [BR:vna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vna03016]
    PN96_21590
Enzymes [BR:vna01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     PN96_21590
Transfer RNA biogenesis [BR:vna03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    PN96_21590
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2
Other DBs
NCBI-ProteinID: ALR18511
Position
2:1531176..1533176
AA seq 666 aa
MFQDNPLLAQLKQQIQENLPKKEGSIKATDKGFGFLEVDSKTSFFIPPAYMKKCIHGDKV
VAIIRTENEREVAEPQELLEQSLTRFIGRVKMFKGKLNVVPDHPQLKKLSLKAKLKKGQK
PDNFNEGDWVVGHLIRHPLKGDNSFFVEISEKITDADDKIAPWWVTLAQNDLPNSEPAGI
ENWELKDDAELDRVDLTHVPFVTIDGESTKDMDDALHAKKTESGDFELTIAIADPTAYIT
PEDEMDKVARERGYTIYLPGRNIPMLPRDLADDLCSLIEGETRPALCCTVSVSKDGVIGD
NINFFAANIKSHARLAYDHVSDWIENGSSDKWQPSEDIATIVRDLYDFSVARADWREKNA
VVFPDRPDYRFELSEDNDVIAIHADMRRSANRLVEESMITANICAGRTLRDKFETGVFNT
HSGLKAEKIEEVVQLVDPEGTHGFTADTIATLEGFAALRRWLSTQETSYLDNRIRKFQAY
SEVGNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKAVILDKEPVQKPDDQVGEELAL
HRKHHKIAERNVSDWLYARTLAEEPSKQTRYIGEIFDINRAGARVRLLENGAAAFIPGSL
IVDNKERIECNGDNGTISIDKEVVYKLGDTLEVVLADVNQENRSLVAKPTQVFAEPPKAQ
TEQTVE
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgtttcaagataacccgctattagcccaacttaagcagcaaatccaagaaaaccttcct
aaaaaagaagggtcaatcaaagcaacagataaaggctttggtttccttgaagtggacagc
aaaaccagtttcttcattccacctgcgtacatgaaaaagtgcattcatggcgataaagta
gtcgccattattcgtacagagaatgaacgtgaagttgcagagccacaagagctgctagaa
cagtcacttactcgctttattggccgtgtaaaaatgttcaaaggtaagctgaatgttgtt
cctgaccaccctcaactgaaaaagttgtcgctaaaagcaaaactaaagaaaggccaaaag
ccagataacttcaatgaaggtgattgggttgtcggccatcttattcgccaccctcttaaa
ggtgacaactctttcttcgtagaaatctctgaaaaaatcacggatgctgacgataagatc
gcaccatggtgggtaaccttggcacaaaacgatcttccaaactctgagcctgctggtatt
gagaactgggagttaaaagacgacgcggaattagaccgcgttgatttaactcacgttcca
ttcgtaactatcgatggcgagtccaccaaagatatggacgatgcgctgcatgcgaagaaa
acagaatctggcgattttgaactgaccatcgcgattgccgatcctaccgcatacattacg
ccagaagatgaaatggacaaagtcgctcgtgagcgtggctacacgatctacttgccaggg
cgcaacatcccaatgctgcctcgcgatcttgctgatgacctatgttctcttattgaaggt
gaaactcgccctgccctttgctgtaccgtaagcgtaagtaaagatggtgtgattggtgat
aacatcaacttctttgctgcgaacattaagtctcacgctcgtcttgcttatgaccacgta
tcagactggatcgaaaatggcagctctgataaatggcagccatcggaagatatcgcaact
atcgtacgtgacctgtacgacttctccgttgctcgtgccgactggcgtgaaaagaacgcg
gttgtattcccggaccgtccggactaccgtttcgaacttagcgaagacaatgacgttatt
gccattcatgcagacatgcgtcgcagtgcaaaccgtcttgtagaagagtcgatgatcaca
gcgaatatctgtgctggccgcacgcttcgcgataagtttgaaactggcgtgttcaacact
cactctggtctcaaagcagagaagattgaagaagttgtacaattagttgacccagaaggt
acacatggcttcacagcggacactatcgcgacactggaaggctttgcagcattacgtcgt
tggttgtctactcaggaaacttcatacttggataaccgcatccgcaagttccaggcgtac
agtgaagtcggcaatcagccacttcctcactacgcgatgggcctagatatttacgcgact
tggacatctccaattcgtaaatacggcgatatgatcaaccaccgtatgctaaaagcggtg
attcttgacaaagaacctgttcaaaagcctgatgatcaagtcggtgaagaactggcatta
caccgtaagcaccacaaaattgcggagcgtaatgtgtctgactggctttacgctcgtact
cttgctgaggagccaagcaaacaaactcgctacatcggtgaaattttcgatatcaatcgt
gctggtgcgcgtgttcgcctgcttgaaaacggcgccgcggcgtttattcctggctcactc
attgttgacaataaagaacgcattgagtgcaacggtgacaacggtactatctccatcgat
aaagaagtggtgtacaagctgggcgatacgctagaagttgtcttggcagatgtgaaccag
gaaaaccgcagtttagttgctaaaccgacgcaagtgttcgctgagccgccaaaagcacag
acggaacaaacggttgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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