KEGG   Virgibacillus necropolis: CFK40_08115
Entry
CFK40_08115       CDS       T04976                                 
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
vne  Virgibacillus necropolis
Pathway
vne00730  Thiamine metabolism
vne01100  Metabolic pathways
vne01240  Biosynthesis of cofactors
vne04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:vne00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    CFK40_08115
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    CFK40_08115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vne03016]
    CFK40_08115
Enzymes [BR:vne01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     CFK40_08115
Transfer RNA biogenesis [BR:vne03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    CFK40_08115
SSDB
Motif
Pfam: ThiI THUMP QueC NAD_synthase ATP_bind_3 tRNA_Me_trans
Other DBs
NCBI-ProteinID: ASN04977
UniProt: A0A221MBH1
Position
1743440..1744639
AA seq 399 aa
MEFDHILIRYGEMALKGKNRKKFYSKLQDNLRNTLVEFPEVKVKRTQGRMFVHLNGQDPA
PVMEKCKEVFGIQSLSLAIKIPNEEQQIKEAALYALKNSTGTKTFKISVKRIDKTFPIRS
QEFNKEVGAHLLLNSKDHSVNVHQPDLDLKIEIRTEATYITCDVIKGAGGFPVGTSGKSL
LLLSGGIDSPVAGYLAMKRGVAIEAVHFHSPPFTSERAKQKVVDLASELTNYGSSIRLHI
VPFTKLQQLVFQKMPDRYSMTIMRRMMLRISEAICKKESILSMTTGESLGQVASQTMDSM
NCINEVTNYPVIRPLITMDKLDIIDVSRKINTYDISIRPFEDCCTIFVPKAPKTKPKREK
VNYFESTINFDALIQEAVEETEVIKITKETKEDQYQDLF
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggaatttgatcacatattaattcgctatggtgaaatggccttaaagggtaaaaataga
aagaaattttatagtaagcttcaggataatttgcgaaacaccttagtagaatttccagaa
gttaaggtgaaacgaactcagggacgaatgtttgttcacttaaatggccaagatcccgca
ccggtcatggagaaatgcaaagaagtatttggaattcagagtttaagcttagcaataaaa
attccaaatgaggaacaacagataaaggaagcggcattgtatgctttaaaaaatagcact
ggaacaaaaacgtttaaaatcagtgtaaaacgaattgataaaacatttcctatccgatca
caggaattcaataaagaagttggagcacatttactactaaattcaaaagaccattcagta
aatgttcatcagccagatttggacctgaaaatagaaattcgaacggaagcgacctatatt
acgtgtgacgtaataaaaggtgcaggtggatttcctgttggaacttccggtaaatcattg
ttactattgtcaggcggtatagacagtcctgtcgcaggctatttagctatgaagcgcggt
gtggcaatcgaagcggtacattttcattctccgccctttacaagtgaacgtgcaaaacaa
aaagtagtggatttggcatctgaactaacaaattacggttcttccattagactgcatatt
gtgccgtttacaaaacttcagcaattagttttccaaaaaatgcctgatcggtattcgatg
acaattatgcgaagaatgatgttacgcataagtgaagcaatctgtaaaaaagaatcaata
ttatctatgacaacaggtgagagtttaggacaggtagcaagtcaaacaatggatagtatg
aattgtataaacgaggtgacaaattatccagtcattcgtccattaatcacgatggacaag
cttgatattattgatgtttccagaaaaataaacacctatgatatttcgatccgtcctttt
gaagattgttgtaccatctttgttccaaaagctcctaaaacaaaaccgaaacgagagaaa
gtaaattattttgagtcaacaatcaattttgatgcgttaattcaagaagcagtggaggaa
actgaggttatcaaaattacaaaagaaacaaaggaagaccagtaccaagatttattttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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