KEGG   Vibrio nigripulchritudo: VIBNI_A0178
Entry
VIBNI_A0178       CDS       T02871                                 
Symbol
ampD
Name
(GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD
  KO
K03806  N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
Organism
vni  Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:vni00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vni01011]
    VIBNI_A0178 (ampD)
Enzymes [BR:vni01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.28  N-acetylmuramoyl-L-alanine amidase
     VIBNI_A0178 (ampD)
Peptidoglycan biosynthesis and degradation proteins [BR:vni01011]
 Peptidoglycan biosynthesis and degradation
  Amidase
   VIBNI_A0178 (ampD)
SSDB
Motif
Pfam: Amidase_2
Other DBs
NCBI-ProteinID: CCO56385
UniProt: U4JU57
Position
1:177955..178512
AA seq 185 aa
MQIDETHWLTDVKRVPSPFCDSRSNEEDISLLVLHHISLPPRDYGGTYIEAFFEGKLDST
IHPFFKVIKGLNVSAHCLIRRNGNIVQFVPFNQRAWHAGVSSFAGRERCNDYSIGIELEG
CEFDSYTDTQYQSLIQLTKLIQKKYPQVTDHRITGHQFIAPLRKSDPGLTFDWRHFRKLL
NSGSK
NT seq 558 nt   +upstreamnt  +downstreamnt
atgcagattgatgaaacacattggttaacagacgtaaaacgggtgccttcgcctttttgt
gattcacgttcaaacgaagaagacatatcgttacttgtgcttcaccacattagcctgcct
cccagagactatgggggcacttatatagaagcgttttttgaagggaagttagacagcacc
atccatcccttctttaaagtaataaagggtttgaatgtttccgcccattgcttgattcgt
cgaaatggcaatattgtccagttcgttccctttaatcagagagcctggcatgcgggcgtg
tcgagttttgctggaagggagcgttgcaatgactactccataggaatcgaactggaaggc
tgtgaatttgatagctataccgatactcagtaccagtcgcttatccagctaaccaaattg
atacaaaaaaaatacccgcaagtgactgaccatcgaattactggtcatcagtttattgcg
ccacttcgcaaatctgaccctgggctcacatttgactggcggcattttcgcaaacttctc
aattctggatcgaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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