KEGG   Vibrio nigripulchritudo: VIBNI_A1372
Entry
VIBNI_A1372       CDS       T02871                                 
Name
(GenBank) putative Pseudouridylate synthase, 23S RNA-specific
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
vni  Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:vni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vni03009]
    VIBNI_A1372
   03016 Transfer RNA biogenesis [BR:vni03016]
    VIBNI_A1372
Enzymes [BR:vni01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     VIBNI_A1372
    5.4.99.29  23S rRNA pseudouridine746 synthase
     VIBNI_A1372
Ribosome biogenesis [BR:vni03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    VIBNI_A1372
Transfer RNA biogenesis [BR:vni03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    VIBNI_A1372
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: CCO57501
UniProt: U4K4J6
Position
1:1465280..1465978
AA seq 232 aa
MFDILFTHPDFYIINKHQGISVHKDEGDTALLTEMCKVTGDAQLYLIHRLDKMTSGLLIV
GRSSQAARELSELFANRNVEKYYLAIGSKKPKKKQGMVMGDMERSRRASWKLTSQMSNPA
ITQFFSHAGEPGQRVFLCKPHTGKTHQIRVALKSVGSPILGDDIYNPSSHADRGYLHAFA
LRFEHKSQPFEFVCNPIEMRELGEHWQTEGVRNSLESWNKPWQLNWPGVRKK
NT seq 699 nt   +upstreamnt  +downstreamnt
atgtttgacatcctctttactcatcccgatttctacatcatcaataaacaccaaggtatc
agcgttcacaaagacgagggtgatacagccttgctgactgagatgtgtaaagtcactggc
gatgcccagctctatctgattcatagattagacaaaatgacttcggggcttctgattgta
ggacgaagttcgcaagcggctcgggagttatcggaactgtttgccaaccgaaacgttgag
aaatactacctcgcaattggttctaaaaagccaaaaaagaagcagggtatggtcatggga
gatatggagcgttccagacgcgcttcctggaagctcaccagccaaatgtctaacccggcc
attacgcagtttttctctcatgctggcgagcctggtcaaagggtcttcctttgcaaaccg
cacactggaaagacacaccaaatccgtgtagccctgaaatcggtcggctctcccattctg
ggcgatgacatttataatccttcatcacacgcagacagaggctatcttcatgcctttgcg
ttaaggtttgaacacaaaagtcagccatttgagtttgtctgtaatcctatagaaatgaga
gaactgggtgagcattggcaaacagaaggcgtgcgcaactcgctagaatcctggaataaa
ccctggcaactgaattggccgggtgtgagaaaaaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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