KEGG   Vibrio nigripulchritudo: VIBNI_A2201
Entry
VIBNI_A2201       CDS       T02871                                 
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
vni  Vibrio nigripulchritudo
Pathway
vni03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vni00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VIBNI_A2201 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vni03400]
    VIBNI_A2201 (xthA)
Enzymes [BR:vni01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     VIBNI_A2201 (xthA)
DNA repair and recombination proteins [BR:vni03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     VIBNI_A2201 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos YozE_SAM_like Exo_endo_phos_3
Other DBs
NCBI-ProteinID: CCO58279
UniProt: U4K6M3
Position
1:2343603..2344409
AA seq 268 aa
MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDDAFPLEDVEAMGYKVYFHGQK
AHYGVAMLCKQEPIEVKKGFPTDNEDHQKRMIMATFEDANGEKVTVLNGYFPQGDNIAHE
TKFPYKEQFYKDLMTYLNDHHTNDEQIIVMGDINISPVDLDIGIGEPNRKRWLKTGKCSF
QPIEREWLQTLLDWGFEDTFRNLHPEVDDKFSWFDYRSRGFDDNRGLRIDVVLATPTLAS
KCIEADIDYELRGIEKPSDHAPIWSVFK
NT seq 807 nt   +upstreamnt  +downstreamnt
atgaaagtaataagtttcaatatcaatggtttgcgtgctcgccttcatcaactacaagca
cttattgataagcaccagccagatgtgattggtttgcaggaaatcaaagttcacgacgat
gctttcccgttagaagatgtggaagcgatgggctacaaagtttacttccatggacagaaa
gcccactacggcgtggccatgttatgtaaacaagagccaattgaagttaaaaaaggcttc
ccaaccgataacgaagatcatcaaaagcgtatgattatggcgactttcgaagacgccaat
ggtgagaaagtcacggtattaaatggttatttccctcagggtgacaatatcgcccatgaa
acaaagtttccatacaaagagcagttctacaaagacttaatgacctaccttaacgatcat
cacaccaacgatgagcaaatcattgtgatgggtgatatcaacattagcccagtcgatctt
gatattggcattggtgaaccaaaccgcaagcgttggttgaaaacgggcaaatgttcattc
cagcctattgaacgtgaatggttgcaaacacttttagattggggattcgaagacacgttc
cgaaatctgcacccagaggtggatgataaattctcatggttcgattaccgctcaagagga
tttgatgacaaccgtggacttcgtattgacgtagttttggcaacgcctactctcgcaagc
aaatgtattgaagcggatatcgactacgaactgcgtgggattgaaaagccgtctgaccac
gcacctatctggtctgtatttaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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