KEGG   Vibrio nigripulchritudo: VIBNI_A2477
Entry
VIBNI_A2477       CDS       T02871                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vni  Vibrio nigripulchritudo
Pathway
vni03030  DNA replication
vni03430  Mismatch repair
vni03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vni00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VIBNI_A2477 (dnaQ)
   03430 Mismatch repair
    VIBNI_A2477 (dnaQ)
   03440 Homologous recombination
    VIBNI_A2477 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vni03032]
    VIBNI_A2477 (dnaQ)
   03400 DNA repair and recombination proteins [BR:vni03400]
    VIBNI_A2477 (dnaQ)
Enzymes [BR:vni01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VIBNI_A2477 (dnaQ)
DNA replication proteins [BR:vni03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VIBNI_A2477 (dnaQ)
DNA repair and recombination proteins [BR:vni03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VIBNI_A2477 (dnaQ)
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: CCO58539
UniProt: U4K7A7
Position
1:complement(2638784..2639524)
AA seq 246 aa
MNTSNNSAHQRIVVLDTETTGMNRESGPHYLDHRIIEIGAVEIVNRKLTGKHFHVYLKPD
REIQPDAILVHGITDEFLVDKPEYRDVHKEFLEFIDGAELVAHNAPFDVGFMDYEFEKLD
SSIGKTEQYCKVTDTLAMAKKIFPGKRNNLDVLCERYGIDNSHRTLHGALLDAEILADVY
LLMTGGQTTLKFNSDEQGDGGTGEAIKRVASGRKSLKVIRASADEIEAHGARLDIVEKAG
ACLWRQ
NT seq 741 nt   +upstreamnt  +downstreamnt
atgaataccagcaacaattctgcgcaccagcgaatcgtggtgctcgataccgaaaccaca
ggtatgaaccgggaaagcggtcctcactatttagatcaccgtatcatcgaaatcggtgcg
gtagaaatcgtcaaccgaaagctgaccggtaagcatttccatgtgtacttgaagcctgac
cgtgaaattcagccagacgcaattctggttcatggtattaccgacgaatttctggtcgac
aaaccagagtatcgggacgtccacaaagagtttcttgagtttatcgacggtgcagaactc
gtcgcgcacaacgcgcccttcgacgtcggtttcatggactatgaattcgagaagctggat
tcctccattggcaagacggagcagtactgcaaggtaaccgatacccttgccatggcgaag
aaaatcttcccgggcaagcgaaataaccttgatgtgttgtgtgaacgctacggcattgat
aactctcaccgaacgcttcacggggcattgctcgatgccgaaattctggcagatgtttat
ctattaatgacaggtgggcaaaccacactaaaatttaatagtgatgagcagggtgacggc
ggtactggcgaagcgattaagcgtgttgcttcaggcagaaagtcccttaaagttattcgt
gcttctgccgatgaaatagaagcgcacggtgcgcgactggatattgttgaaaaagcgggc
gcttgcctctggcgtcaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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