KEGG   Vibrio nigripulchritudo: VIBNI_B1598
Entry
VIBNI_B1598       CDS       T02871                                 
Name
(GenBank) putative exonuclease subunit SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
vni  Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:vni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vni03400]
    VIBNI_B1598
DNA repair and recombination proteins [BR:vni03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VIBNI_B1598
    Archaeal homologous recombinant proteins
     VIBNI_B1598
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 AAA_21 APG6_N ABC_tran AAA_25 SMC_N DUF6317 AAA_22
Other DBs
NCBI-ProteinID: CCO61334
UniProt: U4KHK8
Position
2:complement(1628929..1632603)
AA seq 1224 aa
MKILSLRLKNLNSLKGEWKIDFTQSPFTDNGLFAITGATGAGKTTLLDAICLAIYHKTPR
LGLLTQSSNEAMTRGESECCSEVEFEVKGKAYRAFWSMRRSHKKADGKLQAAEVELAEVE
GGKVIASQAKKKLEEVERITGLDFDRFTKSMMLSQGQFAAFLNAKESERAELLEELTGTE
IYGLISERVHQHWSESKQTLIALESRAQGVQLLDIAYRESLNEELSSLKNQHGTAKKEKE
SFDQCANWIKEKTDLAAELSQTSQSLINAETALAEAKPELDKLADAEPAEQIKPLHDKLS
DIHNTHRQYTESLESLRKQATELESECKDVDAEVKVSESALQSTKVAQQALEDLITQTVI
PLDSDISQGKQKQSSLQSEIHEKNNKKQALDASYQQLRTKLKEQSDTIAESEKFIEQNAN
LKDVAPKLEGWKVQLTALEESSRELTEIDSNLSSLGIQQAEHIEKQKKIEFELELAHSKL
KSNKEKELQLSSRHQALSGASSLEGLEAQQQAMNQQVIVTHQLQGFQERWSLVSNEQQQL
SQKMAQQESELKLRNQQRDSLREQYKSQNQLAQSLAQLVTQEEHLAVYRANLRDDQPCPL
CGSLEHPILADGAVSVPETIAQKEEAEKYLSELKRQGEALSVEIKSVEFQFSENQSKLSA
GQTELEQLQLQWNQKLPALDTTIDIVTPSSAAILTASLEEKVKASQSQISQLKAAEKALE
ESQKQTSTLSEKAVQLENQLKLETKDTQLIEKKQQDFAERKQKLEAQRLEQRQDLQSAMS
EANLKVPDQNVELWINELKDQVDAFQNKEKHLSELRHSVTLVLAEQKNLDSQQSELTDAL
NQLQKQLVETSDLLNERMAKRAEVFANKSVDDERLKAREQVTQAERSTEQIQIKHKSLKE
KQASLSGQQSSINNSLSNTVVSKSQIQSEWEQALSSSPFDTVEQFQSALLPIEEKARIQQ
LKQSLNDSITQLKAIQESANQKLSALNRHEKASEWIDFKLEDIQNQQTEAQRHLEGLTKR
EGEITQELVSDDKRREEQSSLFEEIEQYRVEYDDIQYLHSMIGSQKGDKFRKFAQGLTLD
NLIYLANKQLSRLYGRYQLQRKQGEGLELTVLDLWQGDNERDTKTLSGGESFLVSLALAL
ALSDLVSHKTSIDSLFLDEGFGTLDAQTLDIALDALDSLNASGKMIGVISHIEAMKERIP
VQLKVTKKSGLGISELAPEYRFNP
NT seq 3675 nt   +upstreamnt  +downstreamnt
gtgaaaatactgtctctgaggcttaaaaacctgaactctttaaaaggtgaatggaagatc
gacttcactcagtcaccattcaccgacaatggtttgttcgcgattactggtgcaactggt
gcaggaaaaactacacttcttgatgcaatctgtctggcgatttatcacaaaacccctcgg
cttggtctgttaacccaatccagcaacgaagccatgaccagaggagagtctgagtgctgc
tcagaagtcgaatttgaggtcaaagggaaagcctaccgagcgttttggagcatgcgtcgt
tcacacaaaaaagcggacggcaagcttcaagctgcggaagtggaacttgcggaggtggaa
ggcggaaaagtgatcgcctcgcaagcgaagaaaaagctggaagaggtagagcgcataacc
gggctggactttgacagattcaccaaatccatgatgctgtctcaaggtcagttcgcggct
ttcctaaatgccaaagaatcagaacgtgcagagttgttagaagagttaacaggcaccgag
atctacggtcttatatcagaacgggttcaccagcattggtcagagtcaaaacaaaccttg
attgcgttagaatcaagggctcaaggcgttcaactgcttgatatagcttatcgtgaatcg
ctaaatgaagaactgtcttcgctaaaaaaccagcatggaactgcgaaaaaagagaaagag
tcctttgatcaatgcgctaactggataaaagaaaaaaccgatttggcagcggagcttagc
caaacgtcgcaatcgttgattaatgctgaaacagcacttgccgaagccaagccagagctc
gataaactggctgatgccgagcctgcagagcaaatcaaaccactgcatgacaaactttct
gacatacataatacacatcgccagtacacggaatccctagagagccttcgcaagcaggca
actgagctggagtcagaatgcaaggacgttgatgcggaagttaaggtttcagaatcggcg
ttgcaaagtactaaggtcgctcaacaggcgttagaagacctgattacacaaactgttatc
cctttggacagtgatatttcacaaggtaaacaaaagcaatcgtccttacagtctgaaatt
catgagaagaacaacaaaaagcaagcactggatgcgtcttaccaacagctcagaaccaaa
ctgaaagagcagagtgatacgatcgccgagagcgaaaaattcattgaacaaaatgcaaat
ttgaaagacgtggctccaaagctggaaggttggaaagtccagcttacagctcttgaagag
tcaagtcgcgaactgaccgagattgattcaaatctgtcgtcactcggtattcagcaagct
gagcatattgaaaagcagaaaaaaatagaatttgagttggagctggctcattcaaaactc
aaatcgaacaaagaaaaagaacttcaactaagttcaaggcatcaggctttgtctggggct
tccagccttgaagggctggaagctcaacaacaagcaatgaatcagcaagttattgttacc
catcagttacaagggtttcaggaacgctggtctttagtatctaatgagcaacagcaactg
tctcaaaaaatggctcaacaagagtctgaactgaagctgcgaaatcagcagcgagacagc
ttgcgggaacaatacaaatctcagaatcagctagctcagtcacttgctcaacttgtgaca
caggaagaacatcttgctgtctacagagccaatctgagagatgaccagccatgtccactg
tgcggcagtcttgaacatcctatacttgctgatggtgccgtatcagtgccagaaaccatt
gctcaaaaagaagaagcagaaaaatacctctctgaattaaagcgtcagggagaagctttg
tcggtcgagataaaatctgttgagttccagttttctgagaatcagagcaagctgtcggca
gggcaaacggaactggaacaactccagttgcagtggaaccagaaacttccggcactagac
acaaccattgatattgtcacgccttctagtgcagcaattttgacagcaagcctagaagaa
aaggtcaaagccagtcagtctcagatcagtcaattgaaagccgcagaaaaagctttggaa
gagtcgcagaagcagacttccacactgtcagagaaagcagtgcagcttgaaaatcagctt
aagcttgaaacgaaagacacccaattgattgagaagaaacaacaggattttgctgagcgt
aagcaaaaactggaagctcaacgcttggagcaacgtcaggatctgcaaagtgcgatgtca
gaagcgaatctgaaggttccggaccagaatgtcgaactatggattaatgagctaaaagat
caggttgacgcgtttcagaataaggaaaaacatcttagcgagcttcgtcattcggttacc
ttggtattggcagaacagaaaaatctcgattctcagcaaagtgagttaacagatgcttta
aaccagttgcaaaagcagttagtcgaaacgtcagatctgcttaatgaacgaatggcgaaa
cgagcggaagtgtttgcaaacaagtcagttgacgatgaaaggctgaaagctcgcgaacaa
gtgacacaggcagaaagaagcaccgagcagattcagattaagcacaagtctctgaaagaa
aagcaggcatctctttccgggcagcaatcatcaatcaataatagcctaagcaatactgtg
gtttcaaagagccagattcagagtgaatgggaacaagctttgtcatcgagcccctttgat
actgttgaacagttccaaagtgcgttgttaccaatcgaggaaaaagctcgcattcagcag
ctcaagcagtcgttgaatgattcgattactcaacttaaagctattcaggaaagcgccaat
cagaaactgagtgctctgaaccgccatgagaaagcgtctgaatggattgattttaagcta
gaagacattcaaaaccaacagaccgaagcccaaagacatctggaagggctgacgaaacgt
gaaggtgaaatcactcaggaactggtgtccgacgacaaaaggcgagaagagcaatcctct
ttgtttgaagaaattgaacagtaccgggttgagtatgatgacattcagtatttgcattcg
atgatcggctcccagaagggcgacaaattccgtaaatttgcccaaggtctgaccctcgat
aacctgatttatctggcgaacaaacaactttcaaggctctatggtcgatatcaattacaa
agaaaacaaggcgaagggcttgagctgacagtattggatctttggcagggcgataatgaa
agggacaccaaaacactatcgggtggggagagcttccttgtgagtcttgcactggcgctg
gcgctgtccgatctggtgagccacaaaaccagcatagactccttgttccttgatgaaggt
tttggcaccttagatgcgcaaacgctggatatcgcgctggatgcgttagacagcctgaac
gcatccggaaaaatgataggtgtcatcagccacatagaagcgatgaaagaacgcattcca
gtccagctaaaagtgaccaagaagagtggtttaggtatcagtgagttagcgcctgaatat
cgctttaacccttaa

DBGET integrated database retrieval system