KEGG   Vibrio neocaledonicus: D3H41_06975
Entry
D3H41_06975       CDS       T06228                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vnl  Vibrio neocaledonicus
Pathway
vnl03030  DNA replication
vnl03430  Mismatch repair
vnl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vnl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D3H41_06975
   03430 Mismatch repair
    D3H41_06975
   03440 Homologous recombination
    D3H41_06975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vnl03032]
    D3H41_06975
   03400 DNA repair and recombination proteins [BR:vnl03400]
    D3H41_06975
Enzymes [BR:vnl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D3H41_06975
DNA replication proteins [BR:vnl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D3H41_06975
DNA repair and recombination proteins [BR:vnl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D3H41_06975
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: QCO85853
Position
1:1452482..1453231
AA seq 249 aa
MMWFSKKAEKEHPLLDTSQTPEWSMLFKQLAKEAKDQRLKRYYSTPMVNGETPIEQVPFV
SVDFETTGLNSEEDVILTIGLVPFTIDRVQCNGSAHWVVNPNRELNHESVIIHGITDSEV
KNAPQLSQILGEILDALSGKVVLVHYKNIERQFFNNALLNSIGEGIQFPVVDTLDIEYAI
QRRECRGFINKLKGKKPGSVRLGHARERYGLPAYQPHHALTDALATAELFQAQLQYHFNR
NMPISSVWQ
NT seq 750 nt   +upstreamnt  +downstreamnt
atgatgtggttctcaaaaaaggcagaaaaagaacatccgttgttggatacatcccagacg
ccagagtggtcaatgttgttcaaacaactcgctaaagaagcgaaagaccagaggctcaaa
cgctattattcgacaccgatggttaatggggaaacaccaattgaacaagtgccatttgtc
tcggtagactttgagacaacaggattgaactcggaagaggatgtcattctcacgatcgga
cttgtgccgttcactattgatcgtgttcaatgtaatggttctgctcattgggtcgttaac
ccaaacagagagttaaaccacgagtctgtcattattcacggtatcactgactctgaggtt
aaaaacgcgccgcagctgtctcagatcttgggtgaaatattggatgcgttgtcaggcaaa
gtggtactcgttcactataagaacattgaaaggcagttctttaataacgccttgctaaat
agcatcggagaggggatacagtttcctgttgttgatacgttagatattgagtatgcgata
caacgccgtgaatgcagaggttttatcaataagttgaaaggcaagaaacccggttctgta
cgattagggcacgctcgtgaaagatatggcctccctgcttatcaacctcaccatgccctg
acggatgcgttagcaactgcggagctgtttcaagcacaactgcagtatcactttaatcga
aacatgccaatatcttcggtttggcaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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