KEGG   Vibrio neocaledonicus: D3H41_11430
Entry
D3H41_11430       CDS       T06228                                 
Name
(GenBank) GGDEF domain-containing protein
  KO
K20955  diguanylate cyclase [EC:2.7.7.65]
Organism
vnl  Vibrio neocaledonicus
Pathway
vnl05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vnl00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    D3H41_11430
Enzymes [BR:vnl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.65  diguanylate cyclase
     D3H41_11430
SSDB
Motif
Pfam: GGDEF dCache_1 Alpha-amylase
Other DBs
NCBI-ProteinID: QCO86645
Position
1:complement(2297642..2299102)
AA seq 486 aa
MVNQRRFSLSFVIFFPLALFVVVLLVTTKNYYDAVNRYIDSEYSRIERAMSRGIKVLTAL
DYSFTNYTNYAKPLFEEHNSLVKEGLCYLWPIDVLLLESVYSEGLPAVDLDYMIVGDESL
CQQGSTINQLAEQKAGFAPSLSFLHDIESHIVGIHYIDKRGYVISSPDTYAKNFTRELLS
TLKARPFWQKTAQDKVNITLAGPGPVLDSMEGQVISMTVPVYEKGEHQGVLSIDFDINTL
MASSLGLVGQFHLVSNLQSIPSNSTRIKPVELERLSANHSMYYEYNLWDEAKNLAVFEKY
SLIVALFIYVLSTVVLFYVNMHSERRYFKELAARDPMTSLLNRRGMQTVWRNKMTKKQVA
LAVFDIDNFKKINDTYGHDVGDSAIQLVAKCIRENIRHTDVASRFGGEEFVLAIYDEDSE
GIKLILDRVKKAIDERSTRVTKEGFTISGGVVFSKESRVENFDELFKAADEKLYQAKSTG
KNKICY
NT seq 1461 nt   +upstreamnt  +downstreamnt
atggtaaaccaaaggcgatttagcctctcatttgtcatcttttttcctctggcgttattt
gtagtggttttactcgtgacaacgaaaaattactatgatgcggttaaccgctatatcgat
tctgagtattcgcgtatcgagcgtgcaatgtctcgtggtattaaagtactcacggcttta
gattacagcttcaccaactataccaattacgctaaaccactgtttgaagaacataattct
ttagtcaaagaagggctttgttatctttggcctatagatgtgttattactcgaaagtgtt
tatagtgaagggttacctgcggttgaccttgattatatgatcgtaggggatgaaagctta
tgtcagcaaggttcaacgattaaccagttagctgaacaaaaggcgggttttgcgccgtca
ttgtcatttctgcacgatattgaatcgcacattgttggaatccattacattgacaagcgc
ggttacgttatctcctcacccgatacctacgcaaaaaatttcactagagagcttttgtca
acgctaaaagcccgacctttttggcaaaaaaccgcgcaagataaagtgaacattaccttg
gctggaccagggcctgtgttggactcgatggaaggtcaagtcattagtatgacggtaccc
gtctatgagaaaggagaacatcaaggtgttttgtctattgatttcgacatcaatacgctc
atggcttcgtcgctaggtcttgttggtcagtttcatttggtttccaatttacaatccatt
ccttcaaacagtacacgaatcaaaccagtcgaattagagcgattgagtgcgaatcacagc
atgtactacgagtacaacctttgggatgaagctaagaacctagcggtttttgaaaaatac
agccttattgtcgcactatttatttacgtgctgagtaccgtcgtcttgttctatgtgaat
atgcatagcgagcgacgttactttaaagaactggcagcaagagacccaatgaccagctta
ttgaatcgtcgaggtatgcaaaccgtgtggcgtaataagatgacaaaaaaacaggttgct
ttagcagtgttcgatattgataacttcaagaagatcaacgacacctatggtcatgatgtc
ggtgattctgcaattcagcttgttgcaaaatgtatacgtgaaaatattcgccataccgat
gttgcctcaaggtttggtggcgaagagttcgttttagcgatttatgacgaagattcagag
ggcattaaactcattttagacagagtaaaaaaggccatagatgagcgctcgacacgcgta
acgaaagaaggctttacgatctctggcggtgtggtgtttagtaaagagagccgagtagaa
aactttgatgaattgtttaaagcggcggatgaaaagttatatcaagccaaaagtaccggc
aaaaataagatctgttactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system