KEGG   Vibrio neocaledonicus: D3H41_13575
Entry
D3H41_13575       CDS       T06228                                 
Name
(GenBank) TetR/AcrR family transcriptional regulator
  KO
K10913  TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
Organism
vnl  Vibrio neocaledonicus
Pathway
vnl02020  Two-component system
vnl02024  Quorum sensing
vnl05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vnl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    D3H41_13575
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    D3H41_13575
   05111 Biofilm formation - Vibrio cholerae
    D3H41_13575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vnl03000]
    D3H41_13575
Transcription factors [BR:vnl03000]
 Prokaryotic type
  Helix-turn-helix
   TetR/AcrR family
    D3H41_13575
SSDB
Motif
Pfam: TetR_N DUF3755 TetR_C_11 Radial_spoke_3 HTH_7 LacI
Other DBs
NCBI-ProteinID: QCO87044
Position
1:2752372..2752986
AA seq 204 aa
MDSIAKRPRTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTR
EDLVDEVLNHVVRQFSNFLSDNIDLDLHARENIANITNAMIELVSQDCHWLKVWFEWSAS
TRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSEHLANLFHGICYSLFVQANRA
KGEAELKHLVNSYLDMLCIYNREH
NT seq 615 nt   +upstreamnt  +downstreamnt
atggactcaattgcaaagagacctagaactaggctttctccaattaagcgtaagcaacag
ctaatggaaatcgcattggaagtatttgcgcgccgcggcatcggtcgtggtggtcacgca
gatatcgcagaaattgctcaagtttctgtggcgactgtttttaactacttccctacacgc
gaagacttggtggatgaagttctcaatcacgtcgtacgtcagttctcaaacttcctatcg
gataacatagacctagacttacatgcacgtgaaaacatcgccaatattacgaatgcgatg
atcgagcttgtcagccaagactgtcactggctaaaagtatggttcgagtggagtgcgtca
acacgtgacgaagtatggccattgtttgtttcaactaaccgtactaaccagttgctggta
caaaacatgttcattaaagcaattgaacgtggcgaagtgtgtgaccagcacgattcagaa
cacttggcaaacctgttccacggtatttgttactcactgtttgtccaagcgaaccgcgct
aaaggtgaagcggagctgaaacacctagtgaattcatacttagatatgctttgcatttac
aaccgtgaacactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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