KEGG   Vibrio neocaledonicus: D3H41_14960
Entry
D3H41_14960       CDS       T06228                                 
Name
(GenBank) PBP1A family penicillin-binding protein
  KO
K05366  penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
Organism
vnl  Vibrio neocaledonicus
Pathway
vnl00550  Peptidoglycan biosynthesis
vnl01100  Metabolic pathways
vnl01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:vnl00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    D3H41_14960
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    D3H41_14960
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:vnl01003]
    D3H41_14960
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vnl01011]
    D3H41_14960
Enzymes [BR:vnl01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     D3H41_14960
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     D3H41_14960
Glycosyltransferases [BR:vnl01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   D3H41_14960
Peptidoglycan biosynthesis and degradation proteins [BR:vnl01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   D3H41_14960
SSDB
Motif
Pfam: Transgly PCB_OB Transpeptidase
Other DBs
NCBI-ProteinID: QCO87266
Position
1:3017486..3020047
AA seq 853 aa
MKFIKRLLFLTLICIILGVTTIFGFYQYVKPELPDVATLKDVELQTPMKVFSQDGKLIAQ
FGEKRRIPVTYDEIPQDLIHALIATEDSRFYEHPGIDPIGITRAAVVVAVSGSAKQGAST
ITQQLARNFFLSNEKKIMRKIKEIFIAIHIEQLLSKQEIMELYVNKIFLGYRSYGFGAAA
QVYFGKSLDELTLSEIATLAGMPKAPSTMNPIYSLERATKRRNVVLMRMLDEKYITQEQY
DEARNEPIVARYHSAEIELSAPYVAELARAWAVKEYGEEEAYTSGLNIYMTVDSKLQDAA
NTSAVNNLLSYDERHGYRGAESVLWKEGEAAWDNEQIEKHLKKQPTYGDLYPAVVTKVDD
KTAQVWVKNHEEQTIPWTGMHWARKYITDNRQGSTPKSAHDVLATGQQVWVREVSETDED
DNTTLSWKLSQVPTANTAFVAMNPENGAILSLVGGFNFVHSKFNRATMSVRQVGSSIKPF
IYSAAIDKGLTLATLINDAPINKWDAGSGSAWRPKNSPPTYGGPTRLRLGLAQSKNVMAV
RTLREVGLEETRQYLTRFGFDINQVPRSETIALGAGSLTPMKVAQGYSVFANGGYYVEPF
YVERVEDAFGEVLFKANPKSVCHKDCPQMSEQPENRYADEFGEQDVAIDGLATDNALEND
EPQYAPQVISEQNAFLMREMMYSNIWGGGNWREGTGWNGTGWRAQKLGRRDIGGKTGTTN
DSKDAWYNGYGPGVVAIAWVGFDDHSRALGRTTVNSNLGQGQISGAESGAKTAEPAWIDF
MRVALEGTPEQGKNIPEDIIRVRIDRNSGMLTHKVDSTSMFEYFEKGTEPTEYAGDRLED
SIYSSGSGAEELF
NT seq 2562 nt   +upstreamnt  +downstreamnt
gtgaagttcataaagcgtttattatttttaacattgatttgcataattcttggagtcacc
acaatatttggcttctatcagtacgtgaagcctgaattgccagatgttgcaactctaaaa
gacgttgaattacaaacacctatgaaggtgtttagtcaagacgggaagctgatcgcacag
ttcggtgaaaagcgtcgtattcctgttacttatgacgaaattcctcaagacttaattcac
gcgctcatcgcaaccgaagatagtcgtttctatgagcatcctggtatcgaccctatcggc
atcactcgtgcagcggttgttgttgcggtttcaggctcggctaaacagggtgcaagtacg
attacgcaacagctagctcgtaacttcttcttatctaatgagaagaagatcatgcgtaag
attaaagagatttttattgctatccatattgagcagcttttaagtaagcaagaaatcatg
gagctttatgtcaataaaatcttccttggttaccgctcatatggctttggtgctgccgct
caagtgtattttggcaagagccttgatgaattgacgttaagtgagattgcaacactcgct
ggtatgccaaaagcgccatcaaccatgaacccaatttactctcttgagcgcgcaacaaaa
cgccgtaacgttgtattaatgcgaatgcttgatgagaaatacattacacaagagcagtat
gacgaagcacgcaatgagcctattgtggcgcgttatcatagcgctgagattgagctttcc
gcaccttacgtagcagagttggctcgtgcatgggcagtaaaagaatacggtgaagaagaa
gcttatacctctggcttgaatatctacatgactgtggattctaaactgcaagatgctgca
aatacgtctgcggtaaataacctcttgtcatacgatgaacgtcatggctaccgtggtgca
gaaagtgtgctttggaaagaaggggaagcggcctgggacaatgagcaaatagaaaagcac
ctgaagaaacagccaacttatggtgacctttaccctgcggttgtgacgaaagtcgatgat
aagacggcacaagtatgggttaagaaccatgaagagcaaaccatcccttggactggaatg
cactgggcgcgtaagtacattactgataaccgccaaggctcaacaccaaagtcagcgcat
gatgtgctagcgacaggtcaacaagtttgggttcgcgaagtaagtgaaaccgatgaagat
gacaacacaacactgagctggaaactgagccaagtgccgacagcaaacaccgcgtttgtt
gcgatgaacccagaaaatggcgcgatattgtcgctggttggtggtttcaactttgttcac
agcaagtttaaccgtgcaaccatgtcagtgcgtcaggttggttcaagtatcaagcctttc
atctactcggcagcaattgacaaagggctgactctagccactttgattaacgatgcgccg
attaacaagtgggatgcaggttctggttcagcttggcgaccaaaaaactcaccaccgact
tatggtggtccaacgcgtcttcgcctcggcttagctcaatcaaaaaacgtcatggcagtg
cgtacactccgtgaagttggcctcgaggagacacgtcagtaccttactcgtttcggtttt
gatattaaccaagtaccgcgctcagagaccatcgcactcggagctggcagcttaacacca
atgaaagtggcacaaggttactctgtgtttgcgaacggtggttattacgttgaaccattc
tatgtagaacgcgtggaagatgcattcggtgaagtactgtttaaagccaatccaaagagt
gtttgtcataaggattgtccgcaaatgagcgagcagccagaaaatcgctacgctgatgaa
tttggcgaacaagacgtcgcaattgatggccttgcaacagacaatgcccttgaaaatgat
gaacctcaatatgcaccgcaagttatctctgaacagaatgcattcttaatgcgtgagatg
atgtacagcaacatttggggtggcggtaactggcgtgaaggcacaggttggaatggtaca
ggctggcgcgcgcaaaaacttggtcgtcgagatatcgggggtaaaacgggtacaacgaat
gattccaaggatgcttggtacaatggctatggacctggtgtcgttgcgatagcttgggtt
ggctttgatgatcactcacgtgcacttggccgcaccactgttaacagcaacctagggcaa
ggccaaatttctggtgccgagtcgggtgcgaaaaccgcagagcctgcttggattgacttc
atgcgtgttgcgctagaagggacgccggagcaaggtaaaaatattccagaggatattatt
cgagttcgtattgatcgcaacagcggtatgctaacgcacaaggtagatagcacatcaatg
ttcgaatactttgaaaaaggcacggagcctaccgaatacgctggcgaccgtttagaagat
agtatttattcttcaggctctggcgcagaagaactgttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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