KEGG   Vibrio owensii: A9237_10355
Entry
A9237_10355       CDS       T04844                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
vow  Vibrio owensii
Brite
KEGG Orthology (KO) [BR:vow00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vow03009]
    A9237_10355
   03016 Transfer RNA biogenesis [BR:vow03016]
    A9237_10355
Enzymes [BR:vow01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     A9237_10355
    5.4.99.29  23S rRNA pseudouridine746 synthase
     A9237_10355
Ribosome biogenesis [BR:vow03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    A9237_10355
Transfer RNA biogenesis [BR:vow03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    A9237_10355
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AQW58446
Position
1:2274522..2275274
AA seq 250 aa
MAMLEYNPPTDPWIDVVFEDEQILAVNKPSGLLSVPGRLAEHHDSMWSRLTEQYPDIQVV
HRLDMCTSGLMVLAKNKRAESALKKQFQYRLTHKIYYARVWGHLEQEEGEIDLPLICDWP
NRPLQKVCFEDGKPSKTLFQVAKREDHPDGSKTTIVRLLPITGRSHQLRVHMQALGHPIV
GDEFYATEEAKAFSERLELHAAELSFYHPKCHWLRSIFVPCDFYPEAEAMIFDYFDPARK
LPDYKTLPRP
NT seq 753 nt   +upstreamnt  +downstreamnt
atggcaatgcttgagtacaatccaccaaccgatccttggattgatgtcgtttttgaagat
gagcaaattttggcggtaaacaagccatctggtttgctttctgtgccggggcgtcttgct
gagcatcacgacagtatgtggagtcgcttaaccgagcaatacccagacattcaagttgtg
catcgtttagatatgtgcacttctggcttgatggtactcgctaaaaacaaacgtgcagaa
agtgcgttaaaaaagcagtttcaatatcgattgacgcataagatttactacgcgcgagtt
tggggacatttagagcaagaagagggtgaaatcgacctgccattgatttgtgattggccg
aatcgtcccctgcagaaagtgtgttttgaggatggcaaaccatctaaaacgctgttccaa
gtagcgaagcgagaagatcatcctgatggctcaaagacgacgattgtacgtttgttgccg
atcactggtcgatcacaccagttgcgtgttcacatgcaagcattaggtcacccgattgta
ggcgatgagttttacgcaactgaagaagcgaaagccttctctgagcgcctagaactgcat
gccgctgagttgagcttttaccatccgaaatgccattggctgcgcagcatctttgttcct
tgtgatttttacccggaagcggaagctatgatctttgactatttcgacccagcgcgtaaa
ttaccagattacaaaacactgcctcgcccataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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