KEGG   Vibrio owensii: A9237_13575
Entry
A9237_13575       CDS       T04844                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10912  two-component system, repressor protein LuxO
Organism
vow  Vibrio owensii
Pathway
vow02020  Two-component system
vow02024  Quorum sensing
vow05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vow00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    A9237_13575
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A9237_13575
   05111 Biofilm formation - Vibrio cholerae
    A9237_13575
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vow02022]
    A9237_13575
Two-component system [BR:vow02022]
 Lux family
  LuxQN/CqsS-LuxU-LuxO (quorum sensing)
   A9237_13575
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg HTH_8 AAA_5 Mg_chelatase AAA_16 AAA AAA_2 HTH_23 AAA_19 AAA_22 HTH_29 HTH_7 TIP49 PIF1 HTH_38 HTH_30
Other DBs
NCBI-ProteinID: AQW59023
Position
1:2944911..2946314
AA seq 467 aa
MQQITEGQKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILL
DLRLPDMTGMDVLHAVKKSHPDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRV
TVNNAIRKATKLKNEADNPGNQNYQGFIGSSQTMQQVYRTIDSAASSKASIFITGESGTG
KEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRF
REDLYYRLYVIPLHLPPLRERGEDVIEIAYSLLGYMSHEEGKSFIRFAQDVIERFNSYEW
PGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPVVRQSISKFIEPEIMTVSDIMPLWM
TEKMAIEQAIQACDGNIPRAAGYLDVSPSTIYRKLQAWNSKDEKQNV
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgcaacaaataacagaaggtcaaaagtctcgttatctactaatggtagaagacaccgca
tccgttgcggcattgtaccgttcttacctgacgcctctcggcatcgatattaatattgtt
ggaacaggcagagacgccatcgaaagcctgaaccatcgaattcccgatctgattctgctc
gatctccgcttacctgatatgacggggatggacgtattgcacgcggtgaagaaaagccac
ccagacgtgccaatcatctttatgacagctcatggctctatcgatactgcggtagaagcg
atgcgtcatggttctcaagacttcttaatcaaaccatgtgaagccgaccgtcttcgtgtc
acggtgaacaacgcaattcgcaaagcaaccaagcttaagaatgaagcggataacccgggt
aaccaaaattaccaaggctttattggcagtagccaaaccatgcagcaggtttatcgcacc
attgactccgcagcgagcagtaaagcgagtatttttatcacgggtgaaagtggtaccggt
aaagaagtgtgtgccgaagccattcacgcagcaagcaaacgtggtgataagccgtttatc
gctattaactgtgctgcgatcccgaaagatctgattgaaagtgaattgtttggtcacgta
aaaggcgcgtttaccggtgctgcgaatgatcgccaaggtgcggccgagcttgccgatggt
ggcacgctgttccttgatgaattgtgtgaaatggacttagatcttcaaactaagttattg
cgctttatccaaacgggtactttccaaaaagtgggctcttcaaagatgaagagtgtcgac
gtgcgatttgtatgtgcgaccaaccgcgacccctggaaagaagtgcaagaaggccgtttc
cgtgaagacttgtactaccgtttgtacgtgattcctttgcaccttccaccgttgcgtgag
cgcggcgaagacgtgattgaaatcgcgtactcgctactgggttatatgtctcacgaggaa
ggcaagagttttatccgttttgcacaagatgtgattgaacgtttcaacagttacgaatgg
ccgggtaacgttcgtcagttgcaaaacgtactgcgtaatatcgttgtactgaacaacggt
aaagagattacgttggacatgctgccaccaccactgaatcaaccggtggttcgtcaatca
atttcaaaatttattgaacctgaaattatgacggtgtcagacattatgccgctttggatg
actgaaaaaatggccatcgagcaggcgattcaggcgtgtgacggcaacattccacgcgcc
gcgggctacctagatgtcagcccctcgacgatttatcgcaagttgcaagcttggaatagc
aaggacgaaaaacagaacgtatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (27)   

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