KEGG   Vibrio owensii: A9237_19350
Entry
A9237_19350       CDS       T04844                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
vow  Vibrio owensii
Pathway
vow05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vow00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    A9237_19350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vow03021]
    A9237_19350
Transcription machinery [BR:vow03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A9237_19350
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 KORA Rv2175c_wHTH
Other DBs
NCBI-ProteinID: AQW60193
Position
2:605643..606533
AA seq 296 aa
MNNECFARSRGVTDEMPMKETFSAGKDPYAHYLKDIVGIDLLSREDELHYAKLNRAGDKE
AREVMIESNLRLVVKIAKSYLKRTGNNFTLLDLIEEGNIGLIKAIDKYDPEPGYRFSTYA
VWWIRENIEAALMNNGRTVRLPAHVCKEINSLASKKHDASKTMSKDISISELSHCSGVKV
ERVDELVALSGFIDVSTTVDLNHAPFVLEQCESEYTTDPQQDCEDHCFTQALEHVVNTLP
VKLQQVLIHRFGLFEHNVKTLAEVGDLLNVSNERVRQMQKEAVERIQKRLQFDGWV
NT seq 891 nt   +upstreamnt  +downstreamnt
atgaacaacgagtgttttgctaggtcccgaggtgtcacggatgagatgccaatgaaagaa
acgttttctgcaggtaaagatccttatgcacattacctaaaagacatcgtggggattgat
ttactctctcgagaagatgaactgcattatgccaaactcaatcgagcgggggacaaagaa
gcgcgcgaggtgatgatcgaatctaatttgcgtttagtggtgaagattgccaaaagctac
ttaaagcgtactggcaacaacttcacgctgcttgatttgattgaagagggcaacattggc
ttgatcaaagccatcgacaagtatgatcctgagccgggttatcgtttttcaacttacgct
gtgtggtggattcgcgaaaacattgaagcggcattaatgaacaacggtcgcacggtgcgt
ttacctgctcacgtttgtaaagagataaatagccttgcgtccaaaaagcatgatgcgagc
aaaaccatgagcaaagacatctcgatttctgagttgtcccactgttcaggcgtaaaggta
gagcgtgttgatgagttagtcgcgttgagcggctttatcgatgtttcaacgactgtcgac
cttaatcatgcgccatttgtgctcgaacagtgcgaaagcgaatacacaacagatccacag
caagattgcgaagaccattgctttactcaagcactggagcacgtcgttaacacattgcct
gtgaagttacagcaagtgctgattcatcgcttcggcttatttgaacacaacgtgaaaaca
ttagctgaagtcggggacttactgaatgtctctaacgaacgcgtgagacaaatgcagaaa
gaggcagtagagcgaatacaaaaacgtcttcagtttgatggttgggtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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