KEGG   Vibrio parahaemolyticus RIMD 2210633: VP2972
Entry
VP2972            CDS       T00120                                 
Name
(GenBank) conserved hypothetical protein
  KO
K07181  c-di-GMP phosphodiesterase [EC:3.1.4.52]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VP2972
Enzymes [BR:vpa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     VP2972
SSDB
Motif
Pfam: EAL HDOD
Other DBs
NCBI-ProteinID: BAC61235
UniProt: Q87KK5
Position
1:complement(3170642..3171865)
AA seq 407 aa
MNTTYVARQPIFNRKRQTLGYELLFRDGESNAYPAHIESNRATYRLIVENFLSLGTNPVI
ASSRCFINFPHQSLVRRLPRSLPKNKIVVEVLETCQPTDDLLDAIRELYREGYLIALDDF
TLTPEWRRFLPYVHIVKLDIMAMGLEKACELVKTHLAKRVKYHFLAERVETAEEFEQAKA
AGFKFFQGYFFSKPLVSQTKYVSPEQVLALQLFREVCAPEPDFDRIESIITQDVALSYKL
LRFVNTQITTLEVEISSFRQALIYLGQDKLKQFVSLVVASYISSNKPRELYNLSLQRAQF
CELMSRYQPFSHLNEQGFMVGLLSILDAMLDLSIEALVKQLPLSDSVQQALLHRKGEYGV
LISLEECYERADWHGVEKLSGQLGLSFDEVKASLSEAVRWSQSVVTV
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgaatacaacgtatgtcgctcgtcagccgatttttaaccgtaaaagacagacgctgggt
tatgaattgttatttagagatggggaaagcaacgcctatcccgctcatatcgaatcaaac
cgagcgacataccgattaatcgtcgagaactttctatcactgggtactaacccagtaatt
gcttcttcgcgatgctttatcaactttcctcatcagagcttggtacgtcgtttgcctcgc
agcttgccaaaaaacaaaatcgtcgtagaagtcttagagacttgccaacctaccgatgat
cttctcgatgcaattcgcgagttatatcgagaaggttatttgatcgcgctggatgatttc
accttaacgccggagtggcgtcgcttcttaccttatgtgcacatcgttaaactcgatatc
atggcgatggggctagaaaaagcgtgtgagctggttaaaacccacctcgccaagcgcgtc
aaatatcactttttagcggaacgcgtcgaaaccgcagaagagtttgagcaagccaaagcg
gcgggttttaaattctttcaaggctacttttttagcaagccattggtgtcgcaaaccaaa
tacgtcagtccggagcaggtgttagcgttacaactgtttcgggaagtctgcgcgccagag
ccggattttgaccgcattgaaagcatcattacgcaagatgtggccttgtcgtacaagtta
ctgcgttttgtaaatacccagatcaccacattagaggtggaaatcagctcgttccgtcag
gcgctgatttaccttggtcaagacaagctgaagcaatttgtctctttggtggtggcgtct
tacatctcgagcaacaaaccgcgtgagttgtacaacctctctttgcaacgtgcccagttc
tgtgagctgatgtcgcgttaccaacctttttctcatcttaatgagcaaggctttatggtc
ggcttattgtcgatcttagatgccatgctcgacttatcgatcgaagctttggtgaagcaa
ctgccgttgagtgattctgtgcagcaagcattactgcatcgtaagggtgagtacggcgtg
ctgatctcactagaagaatgctacgagcgagcagattggcatggcgtcgaaaagctctcg
ggtcagttgggtttgtcattcgatgaagtcaaagcctcgttaagtgaagcggttcgctgg
agccaaagcgtcgtcacggtctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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