KEGG   Vibrio parahaemolyticus RIMD 2210633: VP2983
Entry
VP2983            CDS       T00120                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00300  Lysine biosynthesis
vpa00470  D-Amino acid metabolism
vpa01100  Metabolic pathways
vpa01110  Biosynthesis of secondary metabolites
vpa01120  Microbial metabolism in diverse environments
vpa01230  Biosynthesis of amino acids
Module
vpa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    VP2983
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    VP2983
Enzymes [BR:vpa01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     VP2983
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: BAC61246
UniProt: Q87KJ4
Position
1:complement(3182432..3183262)
AA seq 276 aa
MHFHFSKMHGLGNDFMVVDCITQNVFFSQDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLTNKYSISVSTKKGKMILDVEDDGEVTVNM
GVPEFEPNKIPFKAKQKEKTYIMRAGDKTLFCGAVSMGNPHVVTVVDDVDTADVDTLGPL
LESHERFPERVNAGFMQVVSRDHIRLRVYERGAGETQACGSGACGAVAVGILQGLLDESV
KVSLPGGELHISWQGPGKPLFMTGPATHVFDGQLSC
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcatttccacttttccaaaatgcacggtttgggcaacgacttcatggtcgtcgactgc
attacccagaacgtgtttttctcgcaagacttgatccgtcgtttggcggatcgtcacact
ggcgtcggttttgaccaattgcttgtggtagaagcaccttatgatcctgaaaccgacttc
cactatcgcatttttaatgccgatggcagtgaagtggagcaatgcggcaacggcgcgcgc
tgtttcgcgcgttttgttcgtttgaaagggttgaccaataaatacagcatcagcgtgagc
accaagaaaggtaagatgattcttgatgtggaagacgacggtgaagtgacggtcaacatg
ggtgtgccagagtttgaaccgaacaaaattccgttcaaagcgaagcagaaagaaaaaacc
tacatcatgcgcgcgggtgacaagacgctgttttgtggcgctgtcagcatgggtaacccg
catgtggtgacagtagtggatgacgtggataccgcagatgtggacactttaggtccgctg
cttgaatcacacgaacgcttccctgaacgtgtgaacgctggctttatgcaagtggtgagt
cgtgaccacattcgtcttcgagtttacgagcgcggcgcaggtgaaacacaagcttgtggt
agcggcgcatgtggcgcggtggctgtgggtattttgcaagggcttttggatgagagtgtg
aaagtatcgctacctggtggtgagctgcatatttcttggcaaggcccgggcaaaccactc
tttatgacaggccctgctactcacgtatttgatggtcaactgtcgtgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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