KEGG T00120: VP3044

Vibrio parahaemolyticus RIMD 2210633: VP3044

Entry

VP3044            CDS       T00120

Name

(GenBank) Sun protein

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

vpa Vibrio parahaemolyticus RIMD 2210633

Brite

KEGG Orthology (KO) [BR:vpa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vpa03009]
    VP3044
Enzymes [BR:vpa01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     VP3044
Ribosome biogenesis [BR:vpa03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    VP3044

SSDB

Motif

Pfam:

Methyltr_RsmB-F NusB Methyltransf_31 Methyltransf_25 FtsJ Methyltransf_5 Cons_hypoth95 Methyltransf_11 Methyltransf_15 MTS Met_10 Methyltransf_24 Methyltr_RsmF_N TrkA_N

Other DBs

NCBI-ProteinID:

BAC61307

UniProt:

Q87KD3

Position

1:3250455..3251738

AA seq 427 aa
MNVRAAAANVLYLVVDKGHSLSSALPAAQQTVRPRDHALLQEICYGALRYLPRLEMIANQ
LMDKPLKGKQRVFHHLILVGIYQLSFMRIPAHAAVGETVEGTKELKGPRLRGLINAVLRN
YQRNQEELDQMAVSNNAGKYGHPSWLLKLLQDAYPQQWESIVDANNQKAPMWLRVNHQHH
TRDEYLALLKNENIDSTPHTEAMDAIKLAAPCDVMKLPGFDKGWVSVQDAAAQLSINYLK
PQDGELILDCCAAPGGKTAHILERTSGSEVVAIDCDDTRLKRVHENLKRLNLQAKVVCGD
ARNPQEWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQSEIFDAMWTQ
LKPGGTMVYATCSITPQENVEQVKAFLARTADAQLLDSDPDQPGRQILPGEEDMDGFYYA
VLTKTRA

NT seq 1284 nt +upstreamnt +downstreamnt
atgaatgttcgcgctgcggctgctaacgtcctgtatcttgtcgtcgacaagggccactca
ctttcaagcgctcttccagcggctcaacaaacggtacgacctcgtgaccacgctctgcta
caagagatctgttacggtgcgctacgttacctacctcgcctagaaatgatcgcaaaccag
ttgatggataagccgctcaaaggcaaacaacgtgtattccatcacctaattctggttggc
atttaccaactgagcttcatgcgtattcctgcgcacgcagcagtcggtgaaacggttgaa
ggcactaaagagctgaaaggtcctcgtctgcgtggtttgattaacgctgtattgcgtaac
taccaacgcaaccaagaagaactcgaccaaatggccgtcagcaacaacgctggcaaatac
ggtcacccaagctggttactaaaactgctgcaagatgcctacccacagcaatgggaaagc
attgttgatgcgaacaaccaaaaagcaccaatgtggctgcgtgtgaaccatcaacaccac
actcgtgatgaataccttgcgctgctcaaaaatgaaaacattgatagcacgccacacaca
gaagcaatggacgccataaaattggccgcaccatgtgacgtgatgaaactacctggcttt
gataaaggttgggtttcggtacaagatgcggcagcgcagctttcgatcaactacctaaaa
ccacaagacggcgaactgattttagattgctgtgctgcgccaggtggcaagaccgcgcac
attctagagcgcacgtcgggtagtgaagtggtcgcgattgactgcgacgacacacgcttg
aaacgtgtgcatgaaaacctgaagcgtctcaaccttcaggcaaaagtggtttgcggtgat
gcgcgtaatccacaagaatggtggcaaggcgagcaatttgatcgcattttgctggatgcc
ccatgttctgcgactggtgtgattcgtcgtcacccagacatcaaatggctacgtcgtgca
gacgacatcgccgcattagcagagctacaaagtgaaatttttgatgccatgtggacgcaa
ctgaaacccggcggcacaatggtttacgcgacttgttcaatcacaccgcaagaaaacgtg
gagcaagtaaaagcgtttttagcacgtaccgcggatgcgcaactgctggattctgatccc
gaccagcctggtcgtcaaattctaccaggcgaagaagatatggatggtttctactacgca
gtgctaacaaaaacacgcgcgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

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