KEGG   Vibrio parahaemolyticus RIMD 2210633: VPA0190Help
Entry
VPA0190           CDS       T00120                                 

Definition
(RefSeq) hydroxyglutarate oxidase
  KO
K15736  (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00310  Lysine degradation
vpa01100  Metabolic pathways
vpa01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    VPA0190
Enzymes [BR:vpa01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.5  With a quinone or similar compound as acceptor
    1.1.5.13  (S)-2-hydroxyglutarate dehydrogenase
     VPA0190
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DAO Mqo Pyr_redox_2 NAD_binding_8 FAD_binding_3 Trp_halogenase TrkA_N NAD_binding_9 FAD_binding_2 Fe_bilin_red
Motif
Other DBs
NCBI-GeneID: 1190877
NCBI-ProteinID: NP_799700
UniProt: Q87JQ8
Position
II:188702..189928
Genome map
AA seq 408 aa AA seqDB search
MKSVYDYIVVGGGIVGVSTAWQLQQRHPECSILLVEKESGFAKHQTGHNSGVIHAGVYYA
PGSLKADFCKRGVEKTLSFCSQHNIPVENCGKLLVATNEQEVERMNALYERCHVNGIDVG
LLDEAQLKLAEPNITGLGAIYVKTTSIVDYRLVTEHMAQEFQSLGGHISLRTKVVAADEK
DEEVQLTCVSDGQSMQLNCKFLVTCSGLMADRMTKMMGIPTDFQIVPYRGEYYRLDSKHN
QVVNHLIYPIPDPDLPFLGVHLTRMIDGSVTVGPNAVQGWKREGYGKVNFNLQDTLQMLS
FSGFWKVTQKHLKTGLEEFKNSWWKPGYLKLVNKYCPSIRVEDLQPYPAGIRAQAVLSDG
TLVHDFLFAESARSLHVCNAPSPAATSAMPIGEYICDKVDEKVVAKVV
NT seq 1227 nt NT seq  +upstreamnt  +downstreamnt
atgaaatcagtctatgactacattgttgtgggtggtggtatcgttggtgtgtccacggct
tggcagctccaacaacgccatccagagtgttctattttattggttgagaaagagtctggt
tttgctaagcatcaaaccgggcataacagcggcgttatccacgcgggtgtgtattatgcg
ccgggcagtttaaaagccgacttttgcaaacgaggcgtagaaaaaacgctctcgttttgc
tctcagcataatattccggtcgaaaactgcggaaagttgttggttgcaactaacgagcaa
gaagtcgaacgaatgaacgccctttatgaacgctgccacgtcaacgggattgatgtggga
ttgcttgatgaagcgcagctcaaattggcggagccgaatatcacagggttgggcgcgatt
tacgtgaaaaccaccagtattgttgattaccgcttggtaacagagcatatggcacaggag
ttccaaagtttaggtggtcatattagcttgagaaccaaggtggttgccgccgatgagaaa
gatgaagaagtacaactgacttgcgtttccgatgggcaatctatgcagttgaactgcaag
tttctagtcacttgcagtggattgatggccgatcggatgacaaaaatgatgggcattccg
accgattttcaaatcgtgccttatcgcggtgaatactaccgattagacagtaagcataac
caagtggtgaatcacttaatctacccaattccagatccagatttgccatttttgggggtg
cacttgactcgtatgattgatggttctgtgacggttggtccaaatgccgttcagggttgg
aagcgagaagggtatggaaaagtgaactttaacctgcaagatacactgcaaatgttgagt
ttttctggcttttggaaagtcacacaaaagcacttaaaaacgggcttggaagagtttaaa
aactcgtggtggaagcctgggtatttaaaactggtcaataaatattgtccgagtattcgt
gttgaggatctccagccttaccctgcagggattcgcgcgcaagcggtgttgtcggacggc
actctagtgcacgatttcctatttgcagagagtgcaagaagccttcacgtgtgtaatgcg
ccttctccagcggccacatctgccatgcctatcggagagtacatttgcgataaggtcgat
gagaaagtggtagctaaagtcgtctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (27)   

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