KEGG   Vibrio parahaemolyticus RIMD 2210633: VPA1690
Entry
VPA1690           CDS       T00120                                 
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vpa03021]
    VPA1690
Transcription machinery [BR:vpa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VPA1690
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_30 HTH_23 GerE
Other DBs
NCBI-ProteinID: BAC63033
UniProt: Q87FI9
Position
2:1809266..1809751
AA seq 161 aa
MEKQKRYEALTKERYQDIYRLAYWLCKDQHIAEDLAQETFLKAWRFFDNLNDPNAEKSWL
ITILRRENARRFDRKQYDFVDIDECAIQTKTYPGSDHDMAQDWLQKQMMILKPKYREPLL
LSLVAGLNHDEIAQALRLNHNTVATRLFRARNQLIAQQGNH
NT seq 486 nt   +upstreamnt  +downstreamnt
atggaaaaacaaaaacgttacgaagcactgacgaaagagcgataccaagatatctatcgt
ctcgcatattggctgtgcaaagatcaacacattgctgaagatttggcgcaagagaccttc
ctgaaagcgtggcgattctttgataacttaaatgatcccaacgccgagaagtcttggctc
atcactattttgcgtcgtgagaatgctcggcgctttgatagaaaacagtacgattttgtc
gacattgatgagtgtgcaatacagacaaaaacctaccccggcagtgaccacgacatggcc
caagattggcttcaaaaacaaatgatgattctcaaacccaaataccgagagccattgctc
ttgagcctagtggctgggctgaatcatgatgagattgcccaagccttaaggctcaatcac
aacacggtggcgactcgattattcagagcgcgcaaccagctcatcgcgcagcaaggaaac
cattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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