KEGG   Vibrio parahaemolyticus BB22OP: VPBB_0566
Entry
VPBB_0566         CDS       T02409                                 
Name
(GenBank) tRNA:Cm32
  KO
K15396  tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
Organism
vpb  Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:vpb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vpb03016]
    VPBB_0566
Enzymes [BR:vpb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.200  tRNA (cytidine32/uridine32-2'-O)-methyltransferase
     VPBB_0566
Transfer RNA biogenesis [BR:vpb03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    VPBB_0566
SSDB
Motif
Pfam: SpoU_methylase
Other DBs
NCBI-ProteinID: AGB09078
Position
1:617398..618117
AA seq 239 aa
MLDQVKVVLVGTSHSGNIGSAARAMKVMGLSQLVLVDPQCEVDEQTLALAAGAADIAQNA
QVVSTLEEAIEDCGLVVGSSARSRTLEWPMLEPRECGEKFAVEGQKHPVALVFGRERTGL
TNEELQKCHYHVCIPANPEYSSLNLAMAVQTLSYEVRVAHLNLEQKQFSPVEVEEYPRHK
ELEMFFDHLEKVIVETQFINKEQPGQVMNKLRRLFSRARPETQELNILRGILTSIEKKL
NT seq 720 nt   +upstreamnt  +downstreamnt
atgttggatcaagtaaaagtcgtactcgtaggtacctcacattctggcaatattggctca
gcagcccgagcaatgaaggtgatgggtttaagccaacttgtattggtcgatccacaatgt
gaagtggatgaacaaacgctagcactggccgctggtgccgctgatatcgctcagaatgct
caagtcgtaagcacactggaagaagctattgaagactgtggtcttgtggtaggttcaagt
gctcgctctcgcacattagaatggccaatgcttgagccacgtgaatgtggtgaaaagttt
gcagttgaaggccaaaaacatccggtagctttagtgtttgggcgtgaaagaacaggccta
actaacgaagagctacaaaagtgccactatcatgtatgcattcctgctaaccctgaatac
agttccttgaacttagcgatggcggttcaaacgctaagctatgaagttcgtgttgctcat
cttaatcttgagcagaaacaattctcaccagttgaagtcgaagagtaccctcgtcataaa
gagctagaaatgttctttgaccatcttgaaaaggtcatcgtagagacccagtttataaac
aaagaacaacctggccaggtgatgaataaattgcgtcgtcttttctctcgagcacgacca
gagactcaagagttgaatattcttcgcggtattttgacctcgattgaaaagaagctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system