KEGG   Variovorax paradoxus B4: VAPA_1c04440
Entry
VAPA_1c04440      CDS       T02835                                 
Name
(GenBank) putative high-affinity branched-chain amino acid ABC transporter,branched-chain amino acid-binding protein
  KO
K01999  branched-chain amino acid transport system substrate-binding protein
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd02010  ABC transporters
vpd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    VAPA_1c04440
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VAPA_1c04440
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpd02000]
    VAPA_1c04440
Transporters [BR:vpd02000]
 ABC transporters, prokaryotic type
  Phosphate and amino acid transporters
   Branched-chain amino acid transporter
    VAPA_1c04440
SSDB
Motif
Pfam: Peripla_BP_6 Peripla_BP_5 ANF_receptor LppC
Other DBs
NCBI-ProteinID: AGU47574
UniProt: T1X5I4
Position
1:complement(473411..474616)
AA seq 401 aa
MSHPSPKSPALPRTLLSLLLCGAALGGAASAMAAPVKVGLALDISGPFAALGAEARDGFA
LGIKQLGGKLGGQDVEFVQADMAGSPDQAKQLVDRMIQRDKIDIFSGPIGSNVALAVGPT
LFNAKVPYLSANAGPSQFAGAQCNAYFFGTAYQNDQFHEAAGKFAQDRGFKKTVLIAPNY
PAGKDALGGFKRQFKGQVADELYTKLGQIDYAAELAQLRAAKPDSIYFFLPGAMGINFIK
QFVGAGLSKDITLVTSGFSADEDVIGAVGEPMLGLFNTSHWAHDLDNAANKAFVAAFRKE
YNGRYPSVYAAQAYDAILAMDAAVKQSGGNAQNREAVVAALKKANYASTRGSFKYANNHY
PVENFYLRVIGKDAQGKVTNKLINTVLTNYGDSYADKCPLK
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgagccacccgtccccgaagtcgcccgcgctgccgcgcaccctgctttcgctgctgctc
tgcggtgcagcccttggtggcgcggcatcggccatggccgcgcccgtgaaggtgggcctg
gcgctcgacatctcgggcccgttcgcggcattgggcgccgaggcgcgcgacggcttcgcg
ctcggcatcaagcagctgggcggcaagctcggcgggcaggacgtggagttcgtgcaggcc
gacatggccggcagccccgaccaggccaagcagctggtcgaccgcatgatccagcgcgac
aagatcgacatcttcagcggcccgatcggctccaacgtcgcgctggccgtgggcccgacg
ctgttcaacgccaaggtgccgtacctctcggccaatgccggcccgagccagttcgcgggc
gcgcagtgcaatgcctacttcttcggcaccgcctaccagaacgaccagttccacgaggcc
gccggcaagttcgcgcaggaccgcggcttcaagaagaccgtgctgatcgcccccaactac
ccggcgggcaaggatgcgctgggcggcttcaagcgccagttcaagggccaggtggccgac
gagctctacaccaagctcggtcagatcgactacgccgccgaactcgcgcagctgcgcgcg
gcgaagcccgactcgatctacttcttcctgcccggcgcgatgggcatcaacttcatcaag
cagttcgtgggcgcgggcctgtcgaaggacatcacgctcgtgaccagcggcttctcggcc
gacgaggacgtgatcggcgcggtgggcgagccgatgctcggcctgttcaacacctcgcac
tgggcgcacgacctcgacaacgccgccaacaaggccttcgtggccgcgttccgcaaggaa
tacaacggccgctatccgtcggtgtatgcggcgcaggcctatgacgcgatcctggcgatg
gacgcggccgtgaagcaatcgggaggcaacgcccagaaccgcgaagccgtggtcgccgcg
ctgaagaaggccaactacgcatcgacgcgcggcagcttcaagtacgcgaacaaccactat
ccggtcgagaacttctacctgcgcgtgatcggcaaggacgcgcagggcaaggtcacgaac
aagctgatcaacacggttctcacgaactacggcgactcgtacgccgacaagtgtcccctc
aagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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