KEGG   Variovorax paradoxus B4: VAPA_1c05020
Entry
VAPA_1c05020      CDS       T02835                                 
Symbol
leuS
Name
(GenBank) leucine--tRNA ligase LeuS
  KO
K01869  leucyl-tRNA synthetase [EC:6.1.1.4]
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    VAPA_1c05020 (leuS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vpd01007]
    VAPA_1c05020 (leuS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vpd03016]
    VAPA_1c05020 (leuS)
   03029 Mitochondrial biogenesis [BR:vpd03029]
    VAPA_1c05020 (leuS)
Enzymes [BR:vpd01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.4  leucine---tRNA ligase
     VAPA_1c05020 (leuS)
Amino acid related enzymes [BR:vpd01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   VAPA_1c05020 (leuS)
Transfer RNA biogenesis [BR:vpd03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    VAPA_1c05020 (leuS)
 Prokaryotic type
    VAPA_1c05020 (leuS)
Mitochondrial biogenesis [BR:vpd03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    VAPA_1c05020 (leuS)
SSDB
Motif
Pfam: tRNA-synt_1_2 tRNA-synt_1 tRNA-synt_1g Anticodon_1 tRNA-synt_1e tRNA-synt_1f DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: AGU47632
UniProt: T1X414
Position
1:543822..546452
AA seq 876 aa
MNPSYKPSDVESAAQAQWSAADAYRVTEDASRKKYYACSMLPYPSGKLHMGHVRNYTIND
MLTRYLRMSGYNVLMPMGWDAFGLPAENAALKNGVPPAKWTYENIDYMRGQLQAMGLAID
WSREIATCDPSYYKWNQWLFLKMLEKGIAYRKTQVVNWDPVDQTVLANEQVIDGKGWRTG
ATVERREIPGYYLKISDYAEELLEHTQHKLPGWPERVKLMQENWIGKSEGVRFAFTHDIQ
DASGKLIQDGRMYVFTTRADTIMGVTFCAVAPEHPLAAHAATLNPKVAAFIEECKAGGTT
EAELATQEKKGVPTGLTVKHPITDEQVPVWVGNYVLINYGDGAVMGVPAHDERDFAFANK
YGIEIIQVVLVDDEPHFDYHRWQDWYADKQRGVTINSDNFSGMTYKEAVAAVAHALGQKG
LGEMQTTWRLRDWGVSRQRYWGTPIPIIHCDEHGAVPVPEKDLPVVLPTDCVPDGSGNPL
AKHEGFHAGVVCPVCGKPARRETDTMDTFVDSSWYFMRYCDPKNDQAMVAEGADYWMPMD
QYIGGIEHAILHLLYARFWTKVMRDLGLVKVDEPFSKLLTQGMVLNHIYYHRDERGGKNY
HPPLEVTPTLDAQGRIVGGTTADGTKVEYGGVGKMGKSERNGVDPQDLIEKYGADTARLY
TMFTAPPEATLEWNDAAVEGSYRFLRRVWNFGVAQADAQPAAAGGQACGKNAQALRREVH
TVLRQVDYDYQRMQYNTVVSGAMKLLNALEGFKPDGSAGDTAALREGFGILLRCLYPATP
HIAHQLWQQLGYDKELGDLLDAPWPVVDVGALEQDEIELMLQVNGKLRGALRVPAGASKA
EIEALALSCDDFAKFAEGAPAKRVIVVPGRLVNVVI
NT seq 2631 nt   +upstreamnt  +downstreamnt
atgaaccccagctacaaacccagcgacgtcgagtccgctgcccaggcgcaatggagcgcc
gccgatgcctaccgcgtcaccgaggacgcgagccgcaaaaagtactacgcctgctcgatg
ctgccgtaccccagcggcaagctgcacatgggccacgtgcgcaactacaccatcaacgac
atgctcacgcgctacctgcgcatgagcggctacaacgtgctgatgcccatgggctgggac
gccttcggcctgccggccgagaacgcggcgctgaagaacggcgtgcccccggccaagtgg
acctacgagaacatcgactacatgcgcggccagctccaggccatgggcctggcgatcgac
tggagccgcgagatcgccacctgcgatccctcgtactacaagtggaaccagtggctgttc
ctcaagatgctcgaaaagggcattgcctaccgcaagacccaggtcgtcaactgggacccg
gtcgaccagaccgtgctggccaacgagcaggtgatcgacggcaagggctggcgcaccggc
gccacggtcgagcgccgcgagatcccgggctactacctgaagatcagcgactacgccgaa
gaactgctcgagcacacccagcacaagctgccgggctggcccgagcgcgtcaagctgatg
caggagaactggatcggcaagagcgagggcgtgcgcttcgccttcacgcacgacatccag
gacgcgagcggcaagctgatccaggacgggcgcatgtacgtgttcaccacgcgcgccgac
accatcatgggcgtgaccttctgcgccgtggcgcccgagcatccgctggccgcgcacgcc
gccacgctcaatccgaaggtcgcggccttcatcgaggagtgcaaggccggcggcaccacc
gaggccgaactcgccacgcaggagaagaagggcgtgcccacgggcctgaccgtcaagcat
ccgatcaccgacgagcaggtgccggtgtgggtgggcaactacgtgctcatcaactatggc
gacggcgccgtgatgggcgtgcccgcgcacgacgagcgcgacttcgcctttgccaacaag
tacggcatcgagatcatccaggtggtgctggtcgacgacgagccgcacttcgactatcac
aggtggcaggactggtacgccgacaagcagcgcggcgtgaccatcaactccgacaacttc
agcggcatgacctacaaggaggcggtggccgccgtggcgcatgcgctcggccagaagggc
ctgggcgagatgcagaccacctggcgcctgcgcgactggggcgtgagccgccagcgctac
tggggcacgccgatccccatcatccattgcgacgagcacggtgcggtgccggtccccgag
aaggacctgcccgtggtgctgccgaccgactgcgtacccgacggctcgggcaacccgctc
gccaagcacgaaggcttccacgccggcgtggtgtgtcccgtctgtggcaagcccgcgcgg
cgcgagaccgacaccatggacaccttcgtcgacagctcgtggtacttcatgcgctactgc
gacccgaagaacgaccaggccatggtcgccgagggcgccgactactggatgccgatggac
cagtacatcggcggcatcgagcatgcgattcttcacctgctgtacgcgcgcttctggacc
aaggtgatgcgcgacctgggcctggtgaaggtcgacgagcccttcagcaagctgctcacg
cagggcatggtgctcaaccacatctactaccaccgtgacgagaggggcggcaagaactac
cacccgccgctggaggtcacgcccacgctcgacgcgcagggccgcatcgtcggcggcacc
accgcggacggcaccaaggtcgaatacggcggcgtcggcaagatgggcaagagcgagcgc
aacggcgtcgacccgcaggacctgatcgagaagtacggcgccgacaccgcgcgcctgtac
accatgttcaccgcaccgcccgaagccacgctcgagtggaacgacgcagccgtcgaaggc
agctaccggttcctgcgccgggtctggaacttcggcgtggcgcaggccgacgcgcagccc
gcggcggccggcggccaggcctgcggcaagaacgcgcaggcattgcgccgcgaggtgcac
accgtgctgcgccaggtcgactacgactaccagcgcatgcaatacaacacggtggtgtcg
ggcgcgatgaagctgctcaatgcgctggaaggcttcaagcccgacggcagcgccggcgat
acggccgcgctgcgcgaaggcttcggcatcctgctgcgctgcctgtatccggccacgccg
cacatcgcgcaccagctctggcagcagctcggctacgacaaggaactgggcgacctgctc
gacgcgccctggcccgtggtcgacgtgggcgcgctggagcaggacgagatcgagctcatg
ctccaggtcaacggcaagctgcgcggcgcgctgcgcgtgccggccggcgcttccaaggcc
gagatcgaagcgctcgcgctttcctgcgacgacttcgccaagttcgccgaaggcgcgccg
gccaagcgcgtcatcgtggttcccggccggctggtcaacgtggtcatttga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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