KEGG   Variovorax paradoxus B4: VAPA_1c07770
Entry
VAPA_1c07770      CDS       T02835                                 
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
vpd  Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpd03400]
    VAPA_1c07770 (rep)
Enzymes [BR:vpd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VAPA_1c07770 (rep)
DNA repair and recombination proteins [BR:vpd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VAPA_1c07770 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 AAA_12 AAA_11
Other DBs
NCBI-ProteinID: AGU47898
UniProt: T1X5M9
Position
1:complement(849556..851670)
AA seq 704 aa
MSSGLNLAQQEAVNYLHGPCLVLAGAGSGKTRVITHKIGRLIQAGLEPKRIAAITFTNKA
ASEMRERAKGLIGREAKHVVICTFHALGVRMMREDGAVLGLKPAFSILDSDDVTKILKDA
GGTTDTATARIWQWTISKWKNMGLNAAQAEAAAADDNERITARIMARYEERLTAYQSVDF
DDLIGMPLKLLRDFDEVRAKWQAALGHILVDEYQDTNATQYEVLKALAGERGRFTAVGDD
DQSIYGWRGATLDNLRKLPVDYPALKVIKLEQNYRSTSAILRAANNVIGPNPKLFPKTLF
SELGEGEPVRVVDADSEAHEAERAVARIVSLRAGDAMTQGTQGKQYKEFRDFAILYRANH
QARVFEQALRKAQIPYKVSGGQSFFDRAEIKDLCGWFRLWVNNDDDPAFLRAITTPKRGI
GHTTLASLGTFASQYKLSLFEALFSPSLPSVMPKRTLEGIHEFGRYINDLEYRARRTMGA
EDSRTFMLDWLKEIDYEKHLYDGEDSEQAAAARWTNVMEFVDWMSLRAGGAIDDASGADS
NIETERKSLLEVAQTISLLSTISEREQDQNVVTLSTLHASKGLEWPHVMLIGVTEGLLPF
KLEDDNGRQLKVSDETLQRLQEERRLMYVGITRAQRSLAVSWTKKRKQGREMVPCVPSRF
IAEMALDKTTTREDPREKLKALRAEFAQKAQDSAAAKAAAAAAP
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgtcttccggtctcaatctcgcgcagcaagaagcggtcaattacctgcacggcccctgc
ctcgtgctggcgggcgcgggctcgggcaagacgcgcgtcatcacgcacaagatcggccgg
ctgatccaggccggactcgagcccaagcgcattgcggccatcaccttcaccaacaaggcc
gccagcgaaatgcgcgagcgcgccaaggggctgatcgggcgcgaggcgaagcatgtggtg
atctgcacctttcacgcgctgggcgtgcgcatgatgcgcgaagacggcgccgtgctgggc
ctgaagccggccttcagcatcctcgacagcgacgacgtcaccaagatcctgaaggacgcg
ggcggcaccaccgacaccgccaccgcgcgcatctggcagtggaccatcagcaagtggaag
aacatgggcctgaacgccgcgcaggccgaggcggccgccgcggacgacaacgagcgcatc
accgcgcgcatcatggcgcgctacgaagagcggctcacggcctaccagagcgtcgacttc
gacgacctcatcggcatgccgctcaagctgctgcgcgacttcgacgaggtgcgcgccaag
tggcaggccgcgctgggccacatcctggtggacgagtaccaggacaccaacgccacgcaa
tacgaggtgctgaaggcactggccggcgaacgcgggcgcttcaccgcggtgggcgacgac
gaccagtcgatctacggctggcgcggcgccacgctggacaacctgcgcaagctgccggtc
gactatccggccctgaaggtcatcaagctcgaacagaactaccgttcgacgagcgcgatc
ctgcgcgcggccaacaacgtgatcggccccaaccccaagctgtttccgaagacgctgttc
tccgagctcggcgaaggcgagccggtgcgcgtggtcgatgccgactccgaggcgcacgag
gccgagcgcgcggtggcgcgcatcgtcagcctgcgcgcgggcgatgccatgacccaggga
acgcagggcaagcagtacaaggagttccgcgacttcgccatcctttaccgcgccaaccac
caggcgcgcgtgttcgagcaggcattgcgcaaggcgcagatcccctacaaggtgtcgggc
ggccagagcttcttcgaccgcgccgagatcaaggacctgtgcggctggttccgcctctgg
gtcaacaacgacgacgacccggcgttcctgcgcgccatcaccacgcccaagcgcggcatc
ggccacaccacgctcgcgagcctgggcaccttcgccagccagtacaagctgagcctgttc
gaggcgctcttcagcccgtcgctgccgagcgtgatgcccaagcgcacgctcgaaggcatc
cacgagttcggccgctacatcaacgacctcgaataccgcgcgcgccgcaccatgggcgcc
gaggattcgcgcaccttcatgctcgactggctgaaggagatcgactacgagaagcatctc
tacgacggcgaggacagcgaacaggccgcggccgcgcgctggaccaacgtgatggagttc
gtcgactggatgtcgctgcgtgcgggcggagccatcgacgatgcctcgggcgccgacagc
aacatcgagaccgagcgcaagagcctgctcgaggtggcgcagaccatctcgctgctgtcg
accatcagcgagcgcgagcaggaccagaacgtggtcacgctgtcgacgctgcatgcctcc
aagggcctcgaatggccgcacgtgatgctgatcggcgtgaccgagggcctactgcccttc
aagctcgaagacgacaacggccggcagctgaaggtcagcgacgagacgctgcagcggctg
caggaagagcgccgcctcatgtacgtgggcatcacgcgcgcgcagcgcagcctggccgtg
agctggaccaagaagcgcaagcagggccgcgagatggtgccctgcgtgccgagccgcttc
atcgccgagatggccctggacaagaccaccacccgggaagacccgcgcgagaaactcaag
gcgctgcgcgccgagttcgcgcaaaaggcgcaggacagcgcggccgccaaggccgcggcc
gcggcggcgccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system