KEGG   Variovorax paradoxus B4: VAPA_1c29540
Entry
VAPA_1c29540      CDS       T02835                                 
Name
(GenBank) putative amidase
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd00970  Aminoacyl-tRNA biosynthesis
vpd01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    VAPA_1c29540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:vpd03029]
    VAPA_1c29540
Enzymes [BR:vpd01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     VAPA_1c29540
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     VAPA_1c29540
Mitochondrial biogenesis [BR:vpd03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    VAPA_1c29540
SSDB
Motif
Pfam: Amidase
Other DBs
NCBI-ProteinID: AGU50049
UniProt: T1XCJ8
Position
1:3117519..3118844
AA seq 441 aa
MNDLHATRLNVLAGGTDACTEMERAIGIAQSPACSHVFTRTLFDEARRQVARSVPQSRLA
GLAFTAKDLFDIEGQPTPAGSVALSHAPAAKADAVSVARLRAAGGVLTGRTNMTEFAFSG
VGVNPHHGTPANASDAATPRIPGGSSSGAAVSVATGAAFIGLGSDTGGSIRIPAALNGIV
GFKSTARLVPTEGALPLSTTLDTVCAMTRSVRDAVTAHEILAARRVTAGAASLGAYRLAV
VKNVFFDGIEPAVARAFDNALQTLHDAGARIEEIQLPELAELQAINATGGFSAAESYAWH
RLLLERSGAGYDPRVAQRILRGATMKAHEYIDLMHARQAWIARVEAALSPFDAVLSPTVP
ITAPAIASVAPGAERDDEFFRINALLLRNPSIINMLDGCALSLPCQAVGELPVGLMLWHA
SLHDDAVLAVALQAERALQKQ
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgaacgacctccacgccacccgtctgaatgttctggcaggtggcaccgatgcatgcacc
gaaatggagcgcgccatcggcatcgcccagtccccggcctgcagccacgtcttcacccgc
acactcttcgacgaagcccgccggcaggtcgcccgatcggtgccgcaaagcaggctcgcc
ggactcgccttcaccgccaaggacctgttcgacatcgagggccagccaaccccggcgggc
tccgtggcgctctcgcacgcgccggccgccaaggccgatgcagtgtccgtggcgcggctg
cgcgccgcgggcggcgtgctgacgggccgcaccaacatgacggagtttgcgttctccggc
gtgggagtcaacccgcaccacggcacgccggccaacgcgagcgacgcggccacgccgcgc
atcccgggaggctcgtcctccggcgccgccgtctcggtcgccaccggggcggcattcatc
ggcctgggctcggacacgggcggctcgatccgcattcccgccgcgctgaacggcatcgtg
ggtttcaagagcactgcccggctggtgccgaccgaaggcgccctgccgctgtcgaccacg
ctcgacaccgtctgtgccatgacgcgctcggtccgcgacgccgtcacggcgcacgaaatc
ctcgcggcacgccgtgtgaccgccggtgcggcctccctgggggcataccggcttgccgtc
gtgaagaacgtgttcttcgacggcatcgagcccgcggtggcgcgggctttcgacaatgcg
ctgcaaacactgcacgacgccggcgcccggatcgaggagatccagctgccggagctcgcg
gagctgcaggccatcaatgccacgggcggtttttcggcggccgagtcctacgcctggcac
cggctgctgctcgagcgcagcggcgccggctacgacccccgcgtggcccagcgcatcctc
aggggcgccaccatgaaggcacacgaatacatcgatctcatgcatgcccggcaggcctgg
atcgcccgcgtcgaagcagcgctgtcgcccttcgacgcggtgctgtcgcccaccgtaccg
atcaccgcgcccgccattgcgagcgtcgcgccgggcgccgagcgcgacgacgaattcttc
cgcatcaatgcattgctgctgcgcaacccctcgatcatcaacatgctcgacggctgcgcc
ctctcgctgccctgccaggccgttggcgaactgccggtgggcctgatgctgtggcatgcc
tcgctgcacgacgacgccgttctggcggtcgccctgcaagcggaacgagcgctgcaaaaa
caatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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