KEGG   Variovorax paradoxus B4: VAPA_1c52500
Entry
VAPA_1c52500      CDS       T02835                                 
Symbol
rplE
Name
(GenBank) 50S ribosomal protein L5
  KO
K02931  large subunit ribosomal protein L5
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd03010  Ribosome
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    VAPA_1c52500 (rplE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:vpd03011]
    VAPA_1c52500 (rplE)
Ribosome [BR:vpd03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Large subunit
    VAPA_1c52500 (rplE)
  Bacteria
    VAPA_1c52500 (rplE)
  Archaea
    VAPA_1c52500 (rplE)
SSDB
Motif
Pfam: Ribosomal_L5_C Ribosomal_L5
Other DBs
NCBI-ProteinID: AGU52302
UniProt: T1XHC1
Position
1:complement(5519157..5519696)
AA seq 179 aa
MARLQQHYREKIAKDLTEKFGYKSPMQVPRLTKITLNMGVGEAVADKKVLDNAVADLTKI
AGQKPVVTKSKKAIAGFKIRENQPIGCMVTLRGVQMYEFLDRFVTIALPRVRDFRGISGR
AFDGRGNYNIGVKEQIIFPEIEYDKVDALRGLNISITTTAKTDEEAKALLAGFRFPFKN
NT seq 540 nt   +upstreamnt  +downstreamnt
atggcacgtctccaacaacactatcgcgaaaagatcgcgaaagacctgacggaaaagttc
ggctacaagtcgccgatgcaggtcccccgcctcaccaagatcacgctcaacatgggcgtg
ggtgaagctgtcgccgacaagaaggtcctggacaacgcagttgccgacctgaccaagatc
gccggccagaagcccgtggtcaccaagtcgaagaaggccatcgccggtttcaagatccgc
gagaaccagccgatcggctgcatggtcacgctgcgtggcgtgcagatgtatgagttcctg
gaccgtttcgtgaccatcgcgctgccgcgtgttcgcgacttccgcggcatttccggccgt
gcgttcgacggccgtggcaactacaacatcggcgtcaaggaacagatcattttccccgag
atcgaatacgacaaggtcgatgccctgcgcggtctcaacatcagcatcacgacgacggcc
aagaccgacgaagaagccaaggcgcttctcgctggtttccgtttcccgttcaagaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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